. Author manuscript; available in PMC: 2018 Apr 19.

Published in final edited form as: Biochemistry. 2017 Nov 10;56(47):6200–6210. doi: 10.1021/acs.biochem.7b00741

Table 1. Effects of single nucleotide substitutions on Zta binding a non-cytosine containing version of the TRE motif, `TGAGTAAT`.

Shown are Z-scores for Zta binding containing the indicated nucleotides at each position. Z-scores for nucleotides that do not change the motif are in bold. 5mCG Z-scores are shown for substitutions giving rise to a CG dinucleotide.

`TGAGTAAT`	`−4`	`−3`	`−2`	`0`	`2`	`3`	`4`
`TGAGTAAT`	`T`	`G`	`A`	`G`	`T`	`A`	`A`
`A`	9	11	162	2	13	162	162
`C`	10	14	16	46	116	145	5
`G`	7	162	9	162	3	26	8
`T`	162	36	67	4	162	12	20
`M`	82	7	21	7	187	51	6
`H`	66	6	4	3	174	13	7
`5mCG`	43	-	7	-	-	-	-

Table 1. Effects of single nucleotide substitutions on Zta binding a non-cytosine containing version of the TRE motif, TGAGTAAT.

Table 1. Effects of single nucleotide substitutions on Zta binding a non-cytosine containing version of the TRE motif, `TGAGTAAT`.