Table 3.

Comparison of classification performance on ALL-EFS and ALL-OS endpoints using the juxt AG1-G/CNV-G dataset or its embedding obtained using the autoencoder approach

	AG1-G/CNV-G			AG1-G/CNV-G encoding
Endpoint	MCC CV	MCC val	Nfeat	MCC CV	MCC val	Nfeat
ALL-EFS	0.207 (0.141-0.278)	0.197	1000	0.438 (0.374-0.503)	0.360	100
ALL-OS	0.523 (0.443-0.591)	0.359	500	0.545 (0.466- 0.618)	0.538	100