Table 1.
Comparison of the nucleotide and amino acid identities of AAstV/Goose/CHN/2017/SD01 with selected representative astroviruses
| Astrovirus (GenBank accession no.) | Percent identity(%) to AAstV/Goose/CHN/2017/SD01 (MF772821) | |||
|---|---|---|---|---|
| Genome (nt) | ORF1a (aa) | ORF1b (aa) | ORF2 (aa) | |
| TAstV-2 VA/99/USA (EU143851) | 62.4 | 59.5 | 68.7 | 57.6 |
| TAstV-3/ Ohio/2001 (AY769616) | NA | NA | NA | 56.4 |
| DAstV-1 C-NGB/China/200807 (FJ919227) | 60.0 | 48.6 | 64.3 | 56.2 |
| GAstV FLX/China/201406 (KY271027) | 58.1 | 47.7 | 61.0 | 42.5 |
| TAstV-1 (Y15936) | 54.6 | 40.6 | 56.0 | 41.3 |
| DAstV-2 SL5/China/201209 (KF753807) | 60.3 | 58.7 | 68.2 | 38.1 |
| DAstV-3 CPH/China/201306 (KJ020899) | 58.7 | 50.0 | 65.6 | 37.6 |
| CAstV GA2011/USA/200708 (JF414802) | 57.9 | 49.3 | 65.2 | 37.6 |
| CAstV/Poland/G059/201402 (KT886453) | 58.0 | 49.2 | 65.2 | 37.5 |
| GfAstV CDB-2012 301-6/Italy/2003 (JQ307838) | NA | NA | NA | 36.2 |
| DAstV-4 YP2/China/201112 (JX624774) | 56.7 | 42.6 | 61.3 | 34.2 |
| ANV-2 /USA/2009 (HQ188699) | NA | NA | NA | 31.8 |
| Pond Heron AstV KH08-1279/HK/200810 (JX985649) | NA | NA | NA | 31.1 |
| Wood pigeon AstV 06/15660-1/Oslo/200308 (FR727147) | NA | NA | NA | 28.3 |
| ANV-1/Sichuan/2009 (HM029238) | 51.5 | 28.6 | 52.3 | 28.5 |
| Columba livia AstV KG119/HK/200911 (JX985647) | NA | NA | NA | 28.2 |
| Pigeon AstV SH10/Shanghai/201009 (HQ889774) | 52.0 | 27.9 | 52.3 | 27.6 |
| Northern pintail AstV MPJ1442/HK/200912 (JX985652) | NA | NA | NA | 24.4 |
| Northern pintail AstV MPJ1332/HK/200912 (JX985650) | NA | NA | NA | 23.2 |
| HAstV (JN887820) | 49.1 | 20.7 | 38.2 | 19.7 |
NA the complete ORF is not available, HK Hong Kong