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. 2018 Apr 13;9:123. doi: 10.3389/fgene.2018.00123

Table 2.

Genetic differentiation as reported by the function genetic_diff().

CHROM POS Hs_a Hs_b Ht n_a n_b Gst Htmax Gstmax Gprimest
Supercontig_1.50 2 0.42 0.42 0.4650 20 20 0.096 0.710 0.408 0.237
Supercontig_1.50 246 0.42 0.42 0.4632 20 30 0.093 0.698 0.399 0.234
Supercontig_1.50 549 0.42 0.42 0.4600 20 40 0.0870 0.678 0.380 0.229

The chromosome (CHROM) and position (POS) are retained from the VCF data. Heterozygosities for each population (a and b) and total heterozygosity are reported. The number of alleles (n_a, n_b)_observed in each population are reported. Lastly, GST, maximum heterozygosity (Htmax), maximum GST (Gstmax) and G′ST (Gprimest) are calculated.