Table 1.
Clinical details of sequencing patients enrolled in MeDIP-seq, hMeDIP-seq, small RNA-seq, and mRNA array
| Sample No. | Age, y | Sex | Pathological Diagnosis | Surgical Excision | Treatment | AFP | HCG | MeDIP- seq | hMeDIP- seq | smRNA- seq | mRNA Array |
|---|---|---|---|---|---|---|---|---|---|---|---|
| G1 | 14.1 | M | G | STR | RT | N | N | + | + | + | + |
| G2 | 11.6 | M | G | PR | RT | N | N | + | + | – | + |
| G3 | 13.9 | M | G | NTR | RT | N | N | + | + | + | – |
| G4 | 14.0 | M | G | PR | RT+CMT | H | N | + | + | + | + |
| G5 | 11.4 | F | G | PR | RT | N | N | + | + | + | – |
| G6 | 12.4 | M | G | PR | RT | N | N | + | + | + | – |
| G7 | 16.0 | M | G | STR | RT | N | N | – | – | + | + |
| G8 | 12.2 | M | G | PR | RT | N | N | – | – | – | + |
| G9 | 10.4 | F | G | PR | RT | N | N | – | – | – | + |
| NG1 | 11.5 | M | MGCT | STR | RT+CMT | H | N | + | + | + | – |
| (G+IT+YSC) | |||||||||||
| NG2 | 4.3 | M | MGCT | NTR | N | N | + | – | – | + | |
| (G+IT) | |||||||||||
| NG3 | 0.7 | M | IT | NTR | RT+CMT | H | N | + | + | + | – |
| NG4 | 14.5 | M | MGCT | PR | RT+CMT | H | N | + | + | + | + |
| (G+YSC) | |||||||||||
| NG5 | 7.6 | M | MGCT | NTR | RT+CMT | H | H | + | + | + | + |
| (EC+IT+YSC) | |||||||||||
| NG6 | 10.3 | M | MGCT | NTR | RT+CMT | N | N | + | + | + | + |
| (IT+G) | |||||||||||
| NG7 | 0.0 | F | IT | NTR | H | N | – | + | + | + | |
| NG8 | 0.1 | F | IT | NTR | RT+CMT | H | N | – | – | + | – |
| NG9 | 10.6 | M | MGCT | PR | RT+CMT | H | H | – | – | – | + |
| (IT+YSC) |
Abbreviations: G, germinoma; NTR, near total removal, >95%; MGCT, mixed GCT; STR, subtotal removal, >75%; IT, immature teratoma; PR, partial removal, >25% <75%; YSC, yolk sac tumor; RT, radiotherapy; CMT. chemotherapy; normal range of AFP <10 ng/dL; EC, embryonal carcinoma; normal range of betaHCG <10 mIU/dL; “+”: sequenced; “‒”: not sequenced; NG, NGMGCTs or nongerminomatous malignant germ cell tumors; N, normal level; H, high level.