Skip to main content
. 2017 Oct 3;20(4):519–530. doi: 10.1093/neuonc/nox186

Table 2.

Small RNA-sequencing showed 81 upregulated and 78 downregulated miRNAs (top 20 differential miRNAs [left: upregulated; right: downregulated])

Name Average RPM (G) Average RPM (NG) LogFC (NG/G) Name Average RPM (G) Average RPM (NG) LogFC (NG/G)
hsa-miR-675-5p 0.00 18.63 hsa-miR-520a-5p 20.04 0.14 −7.15
hsa-miR-122-5p 1.61 9179.46 12.48 hsa-miR-520f-3p 164.30 1.23 −7.06
hsa-miR-206 5.07 5796.09 10.16 hsa-miR-520b 95.75 0.76 −6.97
hsa-miR-194-3p 0.06 32.15 9.15 hsa-miR-520c-3p 82.19 0.67 −6.94
hsa-miR-585-3p 0.11 49.72 8.78 hsa-miR-515-3p 5.40 0.05 −6.87
hsa-miR- 203b-3p 0.04 13.51 8.48 hsa-miR-526b-3p 17.91 0.25 −6.16
hsa-miR-490-5p 0.08 21.22 8.13 hsa-miR-516b-3p 38.98 0.68 −5.85
hsa-miR- 203a-3p 9.80 2275.29 7.86 hsa-miR-516a-3p 38.98 0.68 −5.85
hsa-miR-196a-5p 6.47 1348.96 7.70 hsa-miR-520e 13.61 0.24 −5.81
hsa-miR-135a-3p 0.72 134.85 7.55 hsa-miR-150-5p 1671.90 31.56 −5.73
hsa-miR- 196b-5p 5.35 949.85 7.47 hsa-miR-3614-5p 4.11 0.10 −5.36
hsa-miR-675-3p 0.78 135.87 7.45 hsa-miR-5701 52.75 1.54 −5.10
hsa-miR- 200b-5p 0.32 39.08 6.93 hsa-miR-96-3p 6.91 0.20 −5.10
hsa-miR-1262 0.28 30.73 6.76 hsa-miR-548x-3p 7.50 0.24 −4.97
hsa-miR- 323b-3p 0.38 40.32 6.72 hsa-miR-202-5p 2.64 0.09 −4.89
hsa-miR-375 7.48 657.19 6.46 hsa-miR-3180-5p 3.89 0.14 −4.84
hsa-miR- 216b-5p 2.02 167.70 6.38 hsa-miR-548aj-3p 10.27 0.39 −4.70
hsa-miR-1-3p 70.71 5608.09 6.31 hsa-miR-6502-5p 1.75 0.07 −4.62
hsa-miR- 487a-5p 0.19 12.97 6.10 hsa-miR-422a 42.78 1.75 −4.62
hsa-miR- 449b-5p 1.38 94.52 6.09 hsa-miR-548ae- 3p 10.24 0.45 −4.52
G: Germinomas NG: NGMGCTs

Abbreviations: RPM, reads per million; G, germinoma; NG, NGMGCTs or nongerminomatous malignant germ cell tumors.