Table 2.
Small RNA-sequencing showed 81 upregulated and 78 downregulated miRNAs (top 20 differential miRNAs [left: upregulated; right: downregulated])
Name | Average RPM (G) | Average RPM (NG) | LogFC (NG/G) | Name | Average RPM (G) | Average RPM (NG) | LogFC (NG/G) |
---|---|---|---|---|---|---|---|
hsa-miR-675-5p | 0.00 | 18.63 | ∞ | hsa-miR-520a-5p | 20.04 | 0.14 | −7.15 |
hsa-miR-122-5p | 1.61 | 9179.46 | 12.48 | hsa-miR-520f-3p | 164.30 | 1.23 | −7.06 |
hsa-miR-206 | 5.07 | 5796.09 | 10.16 | hsa-miR-520b | 95.75 | 0.76 | −6.97 |
hsa-miR-194-3p | 0.06 | 32.15 | 9.15 | hsa-miR-520c-3p | 82.19 | 0.67 | −6.94 |
hsa-miR-585-3p | 0.11 | 49.72 | 8.78 | hsa-miR-515-3p | 5.40 | 0.05 | −6.87 |
hsa-miR- 203b-3p | 0.04 | 13.51 | 8.48 | hsa-miR-526b-3p | 17.91 | 0.25 | −6.16 |
hsa-miR-490-5p | 0.08 | 21.22 | 8.13 | hsa-miR-516b-3p | 38.98 | 0.68 | −5.85 |
hsa-miR- 203a-3p | 9.80 | 2275.29 | 7.86 | hsa-miR-516a-3p | 38.98 | 0.68 | −5.85 |
hsa-miR-196a-5p | 6.47 | 1348.96 | 7.70 | hsa-miR-520e | 13.61 | 0.24 | −5.81 |
hsa-miR-135a-3p | 0.72 | 134.85 | 7.55 | hsa-miR-150-5p | 1671.90 | 31.56 | −5.73 |
hsa-miR- 196b-5p | 5.35 | 949.85 | 7.47 | hsa-miR-3614-5p | 4.11 | 0.10 | −5.36 |
hsa-miR-675-3p | 0.78 | 135.87 | 7.45 | hsa-miR-5701 | 52.75 | 1.54 | −5.10 |
hsa-miR- 200b-5p | 0.32 | 39.08 | 6.93 | hsa-miR-96-3p | 6.91 | 0.20 | −5.10 |
hsa-miR-1262 | 0.28 | 30.73 | 6.76 | hsa-miR-548x-3p | 7.50 | 0.24 | −4.97 |
hsa-miR- 323b-3p | 0.38 | 40.32 | 6.72 | hsa-miR-202-5p | 2.64 | 0.09 | −4.89 |
hsa-miR-375 | 7.48 | 657.19 | 6.46 | hsa-miR-3180-5p | 3.89 | 0.14 | −4.84 |
hsa-miR- 216b-5p | 2.02 | 167.70 | 6.38 | hsa-miR-548aj-3p | 10.27 | 0.39 | −4.70 |
hsa-miR-1-3p | 70.71 | 5608.09 | 6.31 | hsa-miR-6502-5p | 1.75 | 0.07 | −4.62 |
hsa-miR- 487a-5p | 0.19 | 12.97 | 6.10 | hsa-miR-422a | 42.78 | 1.75 | −4.62 |
hsa-miR- 449b-5p | 1.38 | 94.52 | 6.09 | hsa-miR-548ae- 3p | 10.24 | 0.45 | −4.52 |
G: Germinomas | NG: NGMGCTs |
Abbreviations: RPM, reads per million; G, germinoma; NG, NGMGCTs or nongerminomatous malignant germ cell tumors.