Table 1.
Assessment of genome assembly quality for both approaches reveals a vast improvement in the assembly despite a low nanopore sequencing coverage (9X).
Metric | Ion PGM only | Hybrid |
---|---|---|
Assembly length | 6602 908 | 6773 804 |
No. of contigs (>1000 bp) | 338 | 16 |
N50 | 36 090 | 973 739 |
N75 | 19 947 | 745 006 |
Longest contig | 122 046 | 1654 292 |