Skip to main content
. Author manuscript; available in PMC: 2019 Mar 1.
Published in final edited form as: Proteins. 2017 Nov 14;86(Suppl 1):136–151. doi: 10.1002/prot.25414

Figure 6.

Figure 6

(A) Comparison between TM-score of the first model for “hard” and “very hard” targets generated by QUARK with NeBcon predicted contacts (“QUARK” server group in CASP12) and that by original QUARK without contacts (post-CASP experiment). (B) Native structure of T0897-D2 with the NeBcon predicted contacts shown by black dashed lines and the first QUARK model constructed during CASP12. (C) Native contact map for T0897-D2 (upper-left triangle) and NeBcon predicted contact map (lower-right triangle), which was used in structure assembly simulations. Each cross point represents a native or predicted contact. The NeBcon predicted contacts for parallel β-strand pairings and for interaction between β-strand and α-helix are highlighted by rectangles and circles, respectively.