Table 1.
Chromosomal genome similarities between the new Pseudomonas strains (S1E40 and S3E12) and known close relatives based on genome‐to‐genome digital DNA–DNA hybridization (lower diagonal) and MuMmer‐based average nucleotide identity (upper diagonal)
| Reference genome | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | Pseudomonas tolaasii 6264 (AKYY00000000) | 100 | 82.21% | 84.70% | 88.80% | 87.61% | 88.47% | 88.51% | 88.08% | 88.09% | 88.67% | 88.62% |
| 2. | Pseudomonas palleroniana (FNUA00000000) | 32.30% | 100 | 84.51% | 88.43% | 87.23% | 88.08% | 88.99% | 89.22% | 88.30% | 88.51% | 89.74% |
| 3. | Pseudomonas marginalis ICMP 11289 (LKGX00000000) | 22.70% | 22.00% | 100 | 84.7 | 84.50% | 84.70% | 84.70% | 84.53% | 84.53% | 85.00% | 84.70% |
| 4. | Pseudomonas azotoformans LMG 21611T (MDDQ00000000) | 33.80% | 32.90% | 22.40% | 100 | 87.85% | 88.78% | 90.44% | 94.36% | 89.31% | 89.30% | 89.25% |
| 5. | Pseudomonas rhodesiae FF9 (CCYI00000000) | 31.50% | 30.50% | 22.10% | 32.30% | 100 | 87.88% | 87.60% | 87.82% | 88.10% | 88.31% | 88.08% |
| 6. | Pseudomonas veronii DSM 11331T (JYLL00000000) | 33.60% | 32.80% | 22.50% | 34.60% | 32.20% | 100 | 88.58% | 88.70% | 89.28% | 89.24% | 89.16% |
| 7. | Pseudomonas simiae CCUG 50988T (MDFH00000000) | 33.40% | 32.50% | 22.40% | 39.90% | 31.50% | 34.0% | 100 | 90.40% | 88.99% | 89.18% | 89.05% |
| 8. | Pseudomonas extremorientalis LMG 19695T (MDGK00000000) | 34.00% | 32.60% | 22.20% | 55.90% | 32.20% | 34.50% | 39.60% | 100 | 89.22% | 94.10% | 89.74% |
| 9. | Pseudomonas grimontii BS2976 (FNKM00000000) | 33.80% | 33.40% | 22.40% | 35.90% | 32.80% | 36.00% | 35.30% | 35.90% | 100 | 88.64% | 88.50% |
| 10. | Pseudomonas sp. S3E12 (MBDT00000000) | 33.70% | 33.00% | 22.40% | 36.10% | 33.10% | 35.40% | 35.10% | 35.80% | 53.20% | 100 | 89.60% |
| 11. | Pseudomonas sp. S1E40 (MAUE00000000) | 33.70% | 32.80% | 22.50% | 35.70% | 32.50% | 35.40% | 35.10% | 35.80% | 36.80% | 37.00% | 100 |