Table 1.
Summary of sequencing results and read alignment of the RNAseq libraries analyzed in this study
Replicate | No. of read pairs | No. of filtered read pairs (PHRED score >30) | No. of uniquely mapped read pairs | No. of read pairs uniquely mapped to rRNA | No. of read pairs uniquely mapped to CDS | |
---|---|---|---|---|---|---|
WDL1 | 1 | 8,090,000 | 7,921,052 | 6,491,448 | 6,032,872 | 26,258 |
WDL7 | 1 | 1,360,000 | 1,329,361 | 1,169,256 | 1,077,552 | 12,466 |
2 | 470,000 | 463,034 | 420,385 | 384,077 | 6,008 | |
3 | 3,330,000 | 3,248,923 | 2,783,049 | 2,478,562 | 41,470 | |
Consortium | 1 | 15,850,000 | 15,441,928 | 13,920,873 | 13,080,821 | 107,069 |
2 | 25,040,000 | 24,490,945 | 22,529,095 | 14,805,214 | 227,025 | |
3 | 20,590,000 | 20,005,138 | 18,442,744 | 17,227,266 | 134,644 | |
Total | 74,720,000 | 72,900,381 | 65,756,850 | 55,086,363 | 554,940 |
CDS, coding sequences.