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. Author manuscript; available in PMC: 2018 Apr 23.
Published in final edited form as: Res Comput Mol Biol. 2017 Apr 12;10229:287–302. doi: 10.1007/978-3-319-56970-3_18

Table 2.

Biomarker “VBM” and “FreeSurfer” (upper table for “VBM”, lower table for “FreeSurfer”) prediction comparison via correlation coefficient (CorCoe) measurement with different number of selected SNPs. Better performance corresponds to higher CorCoe.

# of
SNPs		 LR RR MTT MTL21 MTT+L21 OURS
30 0.4186±0.0092 0.4180±0.0098 0.4232±0.0088 0.4180±0.0098 0.4216±0.0077 0.6193±0.0177
40 0.4284±0.0163 0.4282±0.0166 0.4333±0.0181 0.4282±0.0166 0.4312±0.0157 0.6294±0.0071
50 0.4476±0.0395 0.4470±0.0400 0.4526±0.0384 0.4470±0.0400 0.4508±0.0385 0.6362±0.0094
60 0.4477±0.0391 0.4471±0.0397 0.4513±0.0388 0.4471±0.0397 0.4510±0.0380 0.6435±0.0196
70 0.4502±0.0345 0.4490±0.0356 0.4547±0.0335 0.4490±0.0356 0.4529±0.0339 0.6460±0.0129
80 0.4467±0.0287 0.4470±0.0286 0.4514±0.0271 0.4470±0.0286 0.4508±0.0268 0.6521±0.0083
30 0.9007±0.0145 0.9008±0.0145 0.9007±0.0145 0.9008±0.0145 0.9010±0.0146 0.9019±0.0147
40 0.9049±0.0113 0.9051±0.0112 0.9049±0.0113 0.9051±0.0112 0.9052±0.0114 0.9060±0.0113
50 0.9045±0.0141 0.9046±0.0141 0.9045±0.0141 0.9046±0.0141 0.9048±0.0142 0.9057±0.0143
60 0.9079±0.0106 0.9080±0.0106 0.9079±0.0106 0.9080±0.0106 0.9081±0.0107 0.9089±0.0106
70 0.9094±0.0105 0.9096±0.0105 0.9094±0.0105 0.9096±0.0105 0.9097±0.0106 0.9106±0.0106
80 0.9114±0.0093 0.9115±0.0093 0.9114±0.0093 0.9115±0.0093 0.9117±0.0094 0.9124±0.0094