Table 1.
QTLs for male-sterile traits detected in this study
| Locus (marker name) | Linkage group | Position (cM) | LOD score | Phenotypic variation explained | EST name | Sequence position | SNP | Segregation type | Description | Length of EST (bp) | E-value | Homologous Arabidopsis locus |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AX-115676114 | 9 | 33.414 | 99.99 | 100.0 | MF_BC_CLC_contig_46230 | 309 | A/G | lmxll | SNARE associated Golgi protein family | 530 | 4.29 | AT4G14950.2 |
| AX-115695236 | 9 | 33.414 | 99.99 | 100.0 | reCj11611 | 1639 | A/G | lmxll | Glycosyl hydrolase family 47 protein | 2558 | 0.00 | AT5G43710.1 |
| AX-115678020 | 9 | 33.414 | 99.99 | 100.0 | reCj19250 | 1927 | A/G | hkxhk | PRH75 DEAD box RNA helicase (PRH75) | 2841 | 0.00 | AT5G62190.1 |
| AX-115675027 | 9 | 33.414 | 99.99 | 100.0 | reCj19250 | 2335 | A/G | hkxhk | PRH75 DEAD box RNA helicase (PRH75) | – | 0.00 | AT5G62190.1 |
| AX-115677965 | 9 | 34.123 | 947.48 | 100.0 | MF_BC_CLC_contig_27478 | 273 | A/G | nnxnp | Pre-mRNA-splicing factor 3 | 2139 | 0.00 | AT1G28060.1 |
| AX-115681104 | 9 | 34.475 | 99.99 | 100.0 | reCj19314 | 126 | T/G | hkxhk | Galactosyltransferase family protein | 2081 | 0.00 | AT5G62620.1 |
| AX-115669347 | 9 | 34.475 | 99.99 | 100.0 | reCj19314 | 166 | T/C | nnxnp | Galactosyltransferase family protein | – | 0.00 | AT5G62620.1 |
| AX-115676564 | 9 | 34.475 | 99.99 | 100.0 | reCj19314 | 432 | A/G | nnxnp | Galactosyltransferase family protein | – | 0.00 | AT5G62620.1 |
| AX-115664995 | 9 | 34.475 | 99.99 | 100.0 | reCj19314 | 859 | T/G | hkxhk | Galactosyltransferase family protein | – | 0.00 | AT5G62620.1 |
| AX-115679030 | 9 | 34.475 | 99.99 | 100.0 | reCj19314 | 1623 | A/G | nnxnp | Galactosyltransferase family protein | – | 0.00 | AT5G62620.1 |
| AX-115665901 | 9 | 34.475 | 99.99 | 100.0 | reCj19314 | 2587 | T/G | nnxnp | Galactosyltransferase family protein | – | 0.00 | AT5G62620.1 |