Table I.
Primers used in the amplification of 9-cis-epoxycarotenoid dioxygenase genes from avocado fruit
Primer | Sequence | Gene Amplified | Orientation |
---|---|---|---|
JZ101 | TTY GAY GGN GAY GGN ATG G | NCED1 | S |
JZ117 | GCY TTC CAN AGR TCR AAR CA | NCED1 | AS |
JZ108 | ACR TAN CCR TCR TCY TC | NCED2 | AS |
JZ110 | ATG ATN CAY GAY TTY GC | NCED2 | S |
JZ120 | GAG GCG GCA AGT GAT | NCED2 | AS |
JZ121 | CAG TTA TTG CGA AAT CAT GC | NCED2 | AS |
JZ147 | AAA TGA GCT GTA TGA AAT GA | NCED2 | S |
JZ148 | CAG TGG AAT CGT GAA AGA GAA | NCED2 | S |
JZ153 | AAC GAA TCT GCG CAG GCA TTT CCG | NCED2 | S |
JZ161 | AAC TTG AAA GCA GTA | NCED2 | S |
JZ162 | GTT TAC GTA GTT TTA TTT TGC TCG | NCED2 | AS |
JZ184 | ACG CCG GTT CCG CTG GAG CCG TCG | NCED1 | AS |
JZ185 | ACA TCG CGA GGA GGT GCC GGT TGA A | NCED1 | AS |
JZ186 | GAT TCA TGA CTT CGT CAT TAC TGA | NCED1 | S |
JZ187 | TTC GTC ATA ATT CCA GAC CAG CAG | NCED1 | S |
JZ200 | CCA ACA ACC CAT TGC TCT TCT | NCED1 | S |
JZ205 | ATT ATA GAG AAC CAG CTA AGG TAC | NCED3 | AS |
JZ206 | TTC CAC ACC TAA AAC AAA CAA ATT | NCED3 | AS |
JZ222 | CCC GGG GAC GCA AGC CTA AT | NCED1 | AS |
JZ223 | TCG ACT CAC TGA GTC GCA | NCED1 | S |
JZ224 | TAC AAG CAG TGG AAG AAG GGA AGG | NCED1 | AS |
JZ225 | GAA CAA GAC CCT GAG ACT GAG | NCED3 | S |
JZ245 | GTC CAA GGC GAA GGC CAG CAG TCC | NCED3 | AS |
JZ240 | CAT TCC CTC GTC GGC GTT CAC CA | NCED3 | AS |
JZ250 | ACT CTT ATG TCA ATG GCT ACT CCT | NCED3 | S |
Y, C/T; N, A/G/C/T; R, A/C; S, Sense; AS, antisense..