Table 1. PANTHER analysis of differentially expressed genes across time points for NV+ and NV− flies. The numbers in the column indicate the total number of genes found either upregulated or downregulated for biological processes of each group from the gene identification numbers (IDs) able to be mapped from PANTHER. Some genes may be represented in more than one GO category. *The numbers in the table are unmapped IDs. nsnot significant.
| Category name (gene ontology accession number) | Day 2 |
Day 10 |
Day 20 |
Day 30 |
FlyBase [20] |
||||
| Up 97* |
Down 2* |
Up 477* |
Down 32* |
Up 304* |
Down 75* |
Up 512* |
Down 324* |
# Genes in GO Category | |
| Biological adhesion (GO: 0022610) | 12 | 0 | 30 | 0 | 27 | 0 | 34 | 3 | 669 |
| Biological regulation (GO: 0065007) | 78 | 0 | 285 | 7 | 246 | 51 | 312 | 272 | 16394 |
| Cellular component organization or biogenesis (GO: 0071840) | 30 | 0 | 70 | 10 | 66 | 50 | 85 | 249 | 7995 |
| Cellular process (GO: 0009987) | 197 | 0 | 617 | 36 | 513 | 179 | 661 | 783 | 43160 |
| Developmental process (GO: 0032502) | 32 | 0 | 136 | 1 | 112 | 10 | 152 | 58 | 5667 |
| Growth (GO: 0040007) | 0 | 0 | 2 | 0 | 1 | 0 | 3 | 1 | 556 |
| Immune system process (GO: 0002376) | 9 | 0 | 26 | 2 | 21 | 3 | 23 | 8 | 743 |
| Localization (GO: 0051179) | 66 | 0 | 168 | 3 | 144 | 22 | 191 | 141 | 12057 |
| Locomotion (GO: 0040011) | 6 | 0 | 17 | 0 | 15 | 1 | 21 | 5 | 846 |
| Metabolic process (GO: 0008152) | 124 | 0 | 419 | 34 | 340 | 162 | 460 | 701 | 45390 |
| Multicellular organism process (GO: 0032501) | 45 | 0 | 208 | 0 | 158 | 7 | 217 | 19 | 8101 |
| Reproduction (GO: 0000003) | 4 | 0 | 16 | 0 | 15 | 7 | 21 | 27 | 2773 |
| Response to stimulus (GO: 0050896) | 48 | 0 | 197 | 8 | 156 | 40 | 173 | 145 | 10778 |
| Rhythmic process (GO: 0048511) | 6ns | 0 | 14 | 0 | 5 | 0 | 13 | 0 | 164 |