Table 1. Top enriched PFAM domains in OrthoMCL-defined isolate-specific genes in C. fructicola 1104–7 and Nara-gc5.
| PFAM | Annotation | Number | Fold Enrichment | B-H P-valuea |
|---|---|---|---|---|
| 1104–7 | ||||
| PF05699 | HAT family C-terminal dimerisation | 9 | 49 | 7.6E-14 |
| PF03732 | Retrotransposon gag protein | 8 | 44 | 1.7E-11 |
| PF00656 | Caspase domain | 8 | 37 | 2.0E-10 |
| PF05225 | Helix-turn-helix, Psq domain | 8 | 34 | 4.4E-10 |
| PF00098 | Zinc knuckle | 7 | 25 | 2.2E-07 |
| PF13646 | HEAT repeats | 6 | 29 | 6.9E-07 |
| PF12796 | Ankyrin repeats (3 copies) | 17 | 5 | 1.4E-06 |
| PF03221 | Tc5 transposase DNA-binding domain | 5 | 25 | 2.5E-05 |
| PF13650 | Aspartyl protease | 4 | 35 | 3.9E-05 |
| PF13668 | Ferritin-like domain | 4 | 25 | 0.0003 |
| PF05730 | CFEM domain | 6 | 5 | 0.002 |
| PF05729 | NACHT domain | 8 | 11 | 0.008 |
| Nara_gc5 | ||||
| PF11702 | Protein of unknown function (DUF3295) | 3 | 32 | 0.006 |
| PF06985 | Heterokaryon incompatibility protein | 17 | 3 | 0.007 |
| PF10551 | MULE transposase domain | 2 | 40 | 0.02 |
| PF01734 | Patatin-like phospholipase | 4 | 15 | 0.02 |
| PF13358 | DDE superfamily endonuclease | 2 | 40 | 0.03 |
| PF00069 | Protein kinase domain | 11 | 3 | 0.03 |
aB-H: Benjamini-Hochberg adjusted