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. Author manuscript; available in PMC: 2019 May 1.
Published in final edited form as: J Pediatr Gastroenterol Nutr. 2018 May;66(5):789–796. doi: 10.1097/MPG.0000000000001926

Table 2.

Significant SNP relations to obesity and insulin resistance using linear regression modeling.

Trait SNP Chromosome BP Gene Minor Major Minor Allele Frequency P-value
BMI z-score rs295120 2 201241967 SPATS2L A C 0.07933 4.0 ×10−6
(Dominant Model) rs2303752 5 115785512 SEMA6A T C 0.1178 9.4 ×10−6
rs17583338 10 12849721 CAMK1D T C 0.271 1.8 ×10−6
rs11026723 11 22689884 GAS2 A G 0.4303 9.5 ×10−6
BMI z-score rs12619898 2 133492286 NCKAP5 G A 0.1498 6.3 ×10−6
(Additive Model) rs17397163 2 133491553 NCKAP5 G A 0.149 5.9 ×10−6
rs11687204 2 133513838 NCKAP5 C T 0.1442 7.5 ×10−6
rs17397380 2 133516599 NCKAP5 A C 0.1442 7.5 ×10−6
rs99521 2 201201190 SPATS2L T G 0.1178 5.7 ×10−6
rs295120 2 201241967 SPATS2L A C 0.07938 4.0 ×10−6
rs8005339 14 52215324 Unknown A G 0.5 5.9 ×10−6
HOMA-IR rs10865041 2 102019801 RFX8 G T 0.2415 4.0 ×10−6
(Additive Model) rs9846667 3 68565824 FAM19A1 A G 0.262 2.9 ×10−6
rs11773571 7 71037932 WBSCR17 C T 0.3534 8.5 ×10−6
rs8046133 16 49502003 Unknown G A 0.05288 7.4 ×10−6
rs4361192 20 18375581 DZANK1 C T 0.2428 3.0 ×10−6
rs2295067 20 18362386 LINC00851 A G 0.2284 7.0 ×10−6
Hgb A1C rs3923850 11 133197686 OPCML A G 0.05529 1.2 ×10−7
(Additive Model) rs11727927 11 133214582 OPMCL G A 0.07971 1.0 ×10−7
rs11644684 16 7934611 Unknown C A 0.06522 1.3 ×10−7