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. 2018 Apr 10;6:41–52. doi: 10.7150/jgen.24228

Table 1.

Transcriptome Sequencing Details. RNA yields ranged from 3.7 to 64.0 µg of purified RNA for beetles across developmental life stages. Sequencing was performed on an Illumina® NextSeq 500. Overall paired-end reads mapping rates of individual sample libraries are included. The representative transcriptome has been filtered for ribosomal RNA, noncoding RNA, microbial and plant contaminating RNA, and mitochondrial sequences; therefore, any reads in the individual libraries mapping to these filtered sequences would not map to the representative transcriptome. bp: base pair, GC: G-C nucleotide ratio

Tissue Reads Bases (bp) GC Content Mapping Rate
Eggs 39,722,314 5,798,921,254 46% 90.5%
First instar larvae 127,028,854 18,509,700,969 45% 89.3%
Second instar larvae 35,479,130 5,167,790,213 46% 85.2%
Third instar larva 39,298,572 5,720,171,102 46% 87.0%
Pupa 111,438,838 16,278,597,449 45% 85.0%
Non-breeding female adult 103,768,508 15,199,597,722 42% 79.4%
Total 456,736,216 66,674,778,709 45% 86.1%