Table 3.

Genome wide basic statistics of the SNP markers among the 208 rice germplasm accessions.

Chr	Size (Mb)	No. of SNPs	Coverage (%)	Average gap (kb)	Largest Gap (kb)
1	43.25	47,896	96.0	0.90	58
2	35.93	40,369	97.6	0.89	107
3	36.39	36,752	97.7	0.99	33
4	35.46	35,119	98.9	1.00	238
5	29.90	28,729	99.5	1.04	75
6	31.24	31,993	97.3	0.97	76
7	29.69	28,919	97.8	1.02	124
8	28.44	30,496	99.7	0.93	95
9	22.90	25,045	96.1	0.91	85
10	23.20	23,531	98.1	0.98	114
11	29.02	36,842	94.1	0.78	528
12	27.53	29,863	99.2	0.92	112
Total	372.96	39,5553	97.7