Table 5.
Number of genes associated with 25 general COGs functional categories
| Code | Value | % value | Description |
|---|---|---|---|
| J | 475 | 5.85 | Translation |
| 0 | 0 | RNA processing and modification | |
| K | 400 | 4.93 | Transcription |
| L | 215 | 2.65 | Replication, recombination and repair |
| B | 2 | 0.02 | Chromatin structure and dynamics |
| D | 102 | 1.25 | Cell cycle control, mitosis and meiosis |
| Y | 0 | 0 | Nuclear structure |
| V | 130 | 1.60 | Defense mechanisms |
| T | 288 | 3.55 | Signal transduction mechanisms |
| M | 260 | 3.20 | Cell wall/membrane biogenesis |
| N | 118 | 1.45 | Cell motility |
| Z | 0 | 0 | Cytoskeleton |
| W | 15 | 0.18 | Extracellular structures |
| U | 66 | 0.81 | Intracellular trafficking and secretion |
| O | 234 | 2.88 | Posttranslational modification, protein turnover, chaperones |
| X | 56 | 0.69 | Mobilome: prophages, transposons |
| C | 358 | 4.41 | Energy production and conversion |
| G | 431 | 5.31 | Carbohydrate transport and metabolism |
| E | 571 | 7.04 | Amino acid transport and metabolism |
| F | 208 | 2.56 | Nucleotide transport and metabolism |
| H | 318 | 3.92 | Coenzyme transport and metabolism |
| I | 333 | 4.10 | Lipid transport and metabolism |
| P | 323 | 3.98 | Inorganic ion transport and metabolism |
| Q | 176 | 2.17 | Secondary metabolites biosynthesis, transport and catabolism |
| R | 560 | 6.90 | General function prediction only |
| S | 403 | 4.96 | Function unknown |
| — | 2832 | 34.92 | Not in COGs |
COGs, Clusters of Orthologous Groups database.