Table 3. Mean accuracy, bias, and SE of EBV and GEBV for resistance against Piscirickettsia salmonis using a 27 K SNP panel.
Methods | Traits | |||||||
---|---|---|---|---|---|---|---|---|
Days to death | Binary survival | |||||||
Accuracy | SE | Biasa | SE | Accuracy | SE | Biasa | SE | |
PBLUP | 0.613 | 0.097 | 1.053 | 0.113 | 0.470 | 0.105 | 0.269 | 0.109 |
LASSO | 0.784 | 0.069 | 0.968 | 0.069 | 0.591 | 0.090 | 0.253 | 0.041 |
GBLUP | 0.785 | 0.064 | 1.026 | 0.092 | 0.598 | 0.082 | 0.240 | 0.049 |
ssGBLUP | 0.798 | 0.061 | 1.035 | 0.091 | 0.608 | 0.082 | 0.267 | 0.048 |
BAYES C | 0.859 | 0.061 | 1.063 | 0.102 | 0.614 | 0.086 | 0.240 | 0.045 |
Regression for the EBV obtained by PBLUP and GEBV predicted with the different genomic methods.