Table 1.
List of taxa and sequences analyzed in this study.
| Family | Genus | Species | Sampling site | accD-GenBank | rbcL-GenBank | matK-GenBank | AccD gene length (codons) |
|---|---|---|---|---|---|---|---|
| Cycadaceae | Cycas | Cycas taitungensis | – | NC_009618 | NC_009618 | NC_009618 | 359 |
| Cycas revoluta | – | NC_020319 | NC_020319 | NC_020319 | 359 | ||
| Ginkgoaceae | Ginkgo | Ginkgo biloba | – | NC_016986 | NC_016986 | NC_016986 | 323 |
| Pinaceae | Cathaya | Cathaya argyrophylla | – | NC_014589 | NC_014589 | NC_014589 | 320 |
| Cedrus | Cedrus deodara | – | NC_014575 | NC_014575 | NC_014575 | 322 | |
| Keteleeria | Keteleeria davidiana | – | NC_011930 | NC_011930 | NC_011930 | 323 | |
| Pseudotsuga | Pseudotsuga sinensis | – | NC_016064 | NC_016064 | NC_016064 | 322 | |
| Larix | Larix decidua | – | NC_016058 | NC_016058 | NC_016058 | 324 | |
| Picea | Picea morrisonicola | – | NC_016069 | NC_016069 | NC_016069 | 326 | |
| Picea sitchensis | – | NC_011152 | NC_011152 | NC_011152 | 320 | ||
| Picea abies | – | AJ001004 | AJ001004 | AJ001004 | 319 | ||
| Pinus | Pinus thunbergii | – | NC_001631 | NC_001631 | NC_001631 | 321 | |
| Strobus | Pinus Koraiensis | – | NC_004677 | NC_004677 | NC_004677 | 320 | |
| Pinus Lambertiana | – | NC_011156 | NC_011156 | NC_011156 | 320 | ||
| Pinus contorta | – | NC_011153 | NC_011153 | AB080921 | 321 | ||
| Pinus gerardiana | – | NC_011154 | NC_011154 | NC_011154 | 320 | ||
| Pinus krempfii | – | NC_011155 | NC_011155 | NC_011155 | 320 | ||
| Pinus nelsonii | – | NC_011159 | NC_011159 | NC_011159 | 320 | ||
| Pinus massoniana | – | NC_021439 | NC_021439 | NC_021439 | 321 | ||
| Pinus taeda | – | NC_021440 | NC_021440 | NC_021440 | 321 | ||
| Podocarpaceae | Podocarpus | Podocarpus macrophyllus | WBG | KT030792 | AY450866 | JQ512476 | 693 |
| Podocarpus neriifolius | WBG | KT030793 | AY450867 | HM593765 | 693 | ||
| Podocarpus totara | – | NC_020361 | NC_020361 | NC_020361 | 683 | ||
| Podocarpus lambertii | – | KJ010812 | KJ010812 | KJ010812 | 683 | ||
| Retrophyllum | Retrophyllum piresii | – | NC_024827 | NC_024827 | NC_024827 | 683 | |
| Nageia | Nageia nagi | WBG | KT030794 | AY450868 | AB644449 | 683 | |
| Nageia nagi | – | NC_023120 | NC_023120 | NC_023120 | 683 | ||
| Nageia fleuryi | WBG | KT030795 | HM593612 | HM593714 | 683 | ||
| Araucariaceae | Araucaria | Araucaria cunninghamii | WBG | KT030797 | JQ512518 | JQ512394 | 849 |
| Agathis | Agathis dammara | – | NC_023119 | NC_023119 | NC_023119 | 819 | |
| Taxaceae | Taxus | Taxus media | WBG | KT030780 | EF660722 | EF660664 | 753 |
| Taxus wallichiana | WBG | KT030784 | EF660717 | DQ478792 | 736 | ||
| Taxus chinensis | WBG | KT030782 | AY450855 | AF228103 | 759 | ||
| Taxus cuspidata | WBG | KT030781 | EF660720 | JX174691 | 759 | ||
| Taxus yunnanensis | IB | KT030783 | AY450857 | JX174720.1 | 767 | ||
| Taxus mairei | – | NC_020321 | NC_020321 | NC_020321 | 735 | ||
| Taxus mairei | – | KJ123824 | KJ123824 | KJ123824 | 773 | ||
| Pseudotaxus | Pseudotaxus chienii | SYSU | KT030788 | AY450858 | AF228105 | 657 | |
| Torreya | Torreya fargesii | WBG | KT030785 | EF660735 | AF228107 | 871 | |
| Torreya grandis | WBG | KT030786 | EF660733 | AF228108 | 879 | ||
| Amentotaxus | Amentotaxus argotaenia | IB | KT030787 | AY450859 | JQ512393 | 916 | |
| Amentotaxus formosana | – | NC_024945 | NC_024945 | NC_024945 | 910 | ||
| Cephalotaxaceae | Cephalotaxus | Cephalotaxus hainanensis | IB | KT030790 | AY450862 | 1070 | |
| Cephalotaxus sinensis | WBG | KT030789 | AY450864 | AB023988 | 1038 | ||
| Cephalotaxus fortunei | WBG | KT030791 | AY450863 | FJ600911 | 1038 | ||
| Cephalotaxus wilsoniana | – | NC_016063 | NC_016063 | NC_016063 | 1056 | ||
| Cephalotaxus oliveri | – | KC136217 | KC136217 | KC136217 | 936 | ||
| Cupressaceae | Taiwania | Taiwania cryptomerioides | – | NC_016065 | NC_016065 | NC_016065 | 800 |
| Taiwania flousiana | NC_021441 | NC_021441 | NC_021441 | 795 | |||
| Cryptomeria | Cryptomeria japonica | NC_010548 | NC_010548 | NC_010548 | 700 | ||
| Metasequoia | Metasequoia glyptostroboides | WBG | KT030796 | JQ512563 | JQ512439 | 697 | |
| Calocedrus | Calocedrus formosana | NC_023121 | NC_023121 | NC_023121 | 800 | ||
| Cunninghamia | Cunninghamia lanceolata | NC_021437 | NC_021437 | NC_021437 | 740 | ||
| Juniperus | Juniperus virginiana | KF866300.1 | KF866300.1 | KF866300.1 | 902 | ||
| Juniperus monosperma | KF866298 | KF866298 | KF866298 | 896 | |||
| Juniperus scopulorum | KF866299 | KF866299 | KF866299 | 884 | |||
| Juniperus bermudiana | KF866297 | KF866297 | KF866297 | 899 | |||
WBG, Wuhan Botanical Garden, Chinese Academy of Sciences; IB, Institute of Botany, Chinese Academy of Sciences; SYSU, Sun Yat-sen University. The underlined accession numbers denote sequences experimentally determined in the present study.