Table 2.
Pfcsp Global Diversity Statistics.
| Continent | Region | Country | n | h | S | K | Hd | π |
|---|---|---|---|---|---|---|---|---|
| Africa | 2,635 | 370 | 33 | 4.11 | 0.948 | 0.117 | ||
| East Africa | 910 | 181 | 26 | 4.05 | 0.951 | 0.116 | ||
| DRC | 268 | 64 | 22 | 4.01 | 0.950 | 0.114 | ||
| Malawi | 534 | 150 | 25 | 3.99 | 0.951 | 0.114 | ||
| Zambia | 108 | 31 | 19 | 4.45 | 0.933 | 0.127 | ||
| West Africa | 1725 | 264 | 31 | 4.11 | 0.945 | 0.117 | ||
| The Gambia | 105 | 23 | 20 | 4.19 | 0.905 | 0.120 | ||
| Ghana | 1109 | 232 | 29 | 4.17 | 0.948 | 0.119 | ||
| Guinea | 175 | 49 | 21 | 3.94 | 0.939 | 0.112 | ||
| Mali | 166 | 53 | 24 | 3.84 | 0.935 | 0.110 | ||
| Nigeria | 7 | 4 | 6 | 2.95 | 0.857 | 0.084 | ||
| Senegal | 163 | 35 | 22 | 4.04 | 0.928 | 0.116 | ||
| Asia | 1,367 | 44 | 20 | 2.58 | 0.780 | 0.074 | ||
| Bangladesh | 80 | 20 | 15 | 2.54 | 0.859 | 0.072 | ||
| Cambodia | 752 | 23 | 17 | 2.66 | 0.807 | 0.076 | ||
| Laos | 129 | 11 | 13 | 2.68 | 0.799 | 0.077 | ||
| Myanmar | 81 | 6 | 9 | 0.65 | 0.349 | 0.019 | ||
| Thailand | 197 | 14 | 12 | 2.09 | 0.589 | 0.060 | ||
| Vietnam | 128 | 15 | 15 | 3.07 | 0.759 | 0.088 |
Summarizes the samples included in the Pfcsp network analysis, including 193 samples sequenced in this study and 3,809 from Pf3k database. n = number of sequences, h = number of unique haplotypes, S = number of segregating sites (out of total possible 35), K = average number of pairwise nucleotide differences, Hd = haplotype diversity, π = nucleotide diversity.