REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Anti-LMN-1 | Gift from Georg Krohne, University of Würzburg, Germany | N/A |
Anti-LMN-1Ser32pi | This paper | N/A |
Anti-SUN-1Ser8pi | (Penkner et al., 2009) | N/A |
Anti-mAB414 | Abcam | Cat#ab5008 |
Anti-HTP-3 | (Goodyer et al., 2008) | N/A |
Anti-SYP-1 | (MacQueen et al., 2002) | N/A |
Anti-RAD-51 | (Colaiacovo et al., 2003) | N/A |
Anti-biotin | Abcam | Cat# ab6650; RRID: AB_305623 |
Chemicals, Peptides, and Recombinant Proteins | ||
SYTO-12 | ThermoFischer Scientific | S7574 |
Vectashield Mounting Medium | Vector Labs | Cat#H-1000 |
(-)-Tetramisole hydrochloride | Sigma-Aldrich | Cat#L9756 |
Critical Commercial Assays | ||
Gateway BP Clonase II Enzyme Mix | ThermoFischer Scientific | Cat#11789020 |
Gateway LR Clonase II Enzyme Mix | ThermoFischer Scientific | Cat#11791100 |
DIG (Digoxigenin)-nick translation Kit | Sigma-Aldrich | Cat#11745816910 |
Experimental Models: Organisms/Strains | ||
C. elegans: N2 Bristol | CGC | https://cgc.umn.edu/strain/search |
C. elegans: [gfp::lmn-1] CrispR: lmn-1(jf98[gfp::lmn-1]) I | This paper | UV117 |
C. elegans: [gfp::lmn-1]; plk-2(K65M): plk-2(tm1395) lmn-1(jf98[gfp::lmn-1]) I; vvSi18 [pie-1p::mCherry::plk-2(K65M), unc-119(+)] II | This paper; plk-2(K65M) was obtained from Monique Zetka, McGill University, Canada | UV118 |
C. elegans: [gfp::lmn-1]; chk-2(me64): lmn-1(jf98[gfp::lmn-1]) I; chk-2(me64) rol-9(sc148)/unc-51(e369) rol-9(sc148) V | This paper | UV119 |
C. elegans: [gfp::lmn-1] MosSCI: lmn-1(tm1502) I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II | This paper | UV120 |
C. elegans: [gfp::lmn-1S32,403A] MosSCI: lmn-1(tm1502) I; jfSi72[Plmn-1S(32, 403)A::gfp cb-unc-119(+)] II | This paper | UV121 |
C. elegans: [gfp::lmn-1S8A] MosSCI: lmn-1(tm1502) I; jfSi89[Plmn-1S(21,22,24,32,397,398,403,405)A::gfp cb-unc-119(+)] II | This paper | UV122 |
C. elegans: ieDF2: ieDF2/mIs11 | (Harper et al., 2011) | ieDF2 |
C. elegans: spo-11(ok79): spo-11(ok79) IV/nT1 [qIs51] (IV;V) | (Dernburg et al., 1998) | UV123 |
C. elegans: [gfp::lmn-1]; [sun-1::mRuby]: lmn-1(tm1502) I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II; ieSi21 [sun-1p::sun-1::mRuby::sun-1 3′UTR + Cbr-unc-119(+)] IV | This paper | UV124 |
C. elegans: [gfp::lmn-1S8A]; [sun-1::mRuby]: lmn-1(tm1502) I; jfSi89[Plmn-1S(21,22,24,32,397,398,403,405)A::gfp cb-unc-119(+)] II; ieSi21 [sun-1p::sun-1::mRuby::sun-1 3′UTR + Cbr-unc-119(+)] IV | This paper | UV125 |
C. elegans: [gfp::lmn-1]; [him-8::mCherry]; sun-1(jf18): lmn-1(tm1502) I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II; jfSi62 [pie-1p::mCherry::him-8::unc-543′UTR cb-unc-119 (+)], him-8(tm611) IV; sun-1(jf18) V/nT1 [qIs51] (IV;V) | This paper | UV126 |
C. elegans: [gfp::lmn-1S32,403A]; [him-8::mCherry]; sun-1(jf18): lmn-1(tm1502) I; jfSi72[Plmn-1S(32, 403)A::gfp cb-unc-119(+)] II; jfSi62 [pie-1p::mCherry::him-8::unc-543′UTR cb-unc-119 (+)], him-8(tm611) IV; sun-1(jf18) V/nT1 [qIs51] (IV;V) | This paper | UV127 |
C. elegans: [gfp::lmn-1S8A]; [him-8::mCherry]; sun-1(jf18): lmn-1(tm1502) I; jfSi89[Plmn-1S(21,22,24,32,397,398,403,405)A::gfp cb-unc-119(+)] II; jfSi62 [pie-1p::mCherry::him-8::unc-543′UTR cb-unc-119 (+)], him-8(tm611) IV; sun-1(jf18) V/nT1 [qIs51] (IV;V) | This paper | UV128 |
C. elegans: ced-3; [gfp::lmn-1]: lmn-1(tm1502) I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II; ced-3(n717) IV | This paper | UV129 |
C. elegans: ced-3; [gfp::lmn-1S32,403A]: lmn-1(tm1502) I; jfSi72[Plmn-1S(32, 403)A::gfp cb-unc-119(+)] II; ced-3(n717) IV | This paper | UV130 |
C. elegans: ced-3; [gfp::lmn-1S8A]: lmn-1(tm1502) I; jfSi89[Plmn-1S(21,22,24,32,397,398,403,405)A::gfp cb-unc-119(+)] II; ced-3(n717) IV | This paper | UV131 |
C. elegans: [gfp::lmn-1]; spo-11(ok79): lmn-1(tm1502) I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II; spo-11(ok79) IV/nT1 [qIs51] (IV;V) | This paper | UV132 |
C. elegans: [gfp::lmn-1S8A]; spo-11(ok79): lmn-1(tm1502) I; jfSi89[Plmn1S(21,22,24,32,397,398,403,405)A::gfp cb-unc-119(+)] II; spo-11(ok79) IV/nT1 [qIs51] (IV;V) | This paper | UV133 |
C. elegans: [sun-1S10A::gfp]∗: jfSi49[Psun-1::gfp S(8, 12, 16, 24, 36, 43, 58, 62, 69, 78)A cb-unc-119(+)] IV; sun-1 (ok1282) V ∗This strain contains the mutated phospho sites described in (Woglar et al., 2013) and three sites found with more sensitive mass spectrometry detection (16, 69, 78). |
This paper | UV134 |
C. elegans: [gfp::lmn-1]; [sun-1::gfp]: lmn-1(tm1502) I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II; jfSi26[Psun-1::GFP cb-unc-119(+)] IV; sun-1(ok1282) V | This paper | UV135 |
C. elegans: [gfp::lmn-1S32,403A];[sun-1S10A::gfp]: lmn-1(tm1502) I; jfSi72[Plmn-1S(32, 403)A::gfp cb-unc-119(+)] II; jfSi49[Psun-1::gfp S(8, 12, 16, 24, 36, 43, 58, 62, 69, 78)A cb-unc-119(+)] IV; sun-1 (ok1282) V | This paper | UV136 |
C. elegans: [gfp::lmn-1S8A]; [sun-1S10A::gfp]: lmn-1(tm1502) I; jfSi89[Plmn-1S(21,22,24,32,397,398,403,405)A::gfp cb-unc-119(+)] II; jfSi49[Psun-1::gfp S(8, 12, 16, 24, 36, 43, 58, 62, 69, 78)A cb-unc-119(+)] IV; sun-1 (ok1282) V | This paper | UV137 |
C. elegans: [gfp::lmn-1]; [sun-1S10A::gfp]: lmn-1(tm1502) I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II; jfSi49[Psun-1::GFP S(8, 12, 16, 24, 36, 43, 58, 62, 69, 78)A cb-unc-119(+)] IV; sun-1 (ok1282) V | This paper | UV138 |
C. elegans: [lmn-1S32,403,470A]: lmn-1(tm1502) I; jfSi76[Plmn-1S(32,403,470)A cb-unc-119(+)] II | This paper | UV139 |
C. elegans: [gfp::lmn-1]; [sun-1::gfp] spo-11(ok79): lmn-1(tm1502) I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II; jfSi26[Psun-1::gfp cb-unc-119(+)] spo-11(ok79) IV/nT1 [qIs51] (IV;V); sun-1(ok1282) V/nT1 [qIs51] (IV;V) | This paper | UV140 |
C. elegans: [gfp::lmn-1S8A]; [sun-1S10A::gfp] spo-11(ok79): lmn-1(tm1502) I; jfSi89[Plmn-1S(21,22,24,32,397,398,403,405)A::gfp cb-unc-119(+)] II; jfSi49[Psun-1::gfp S(8, 12, 16, 24, 36, 43, 58, 62, 69, 78)A cb-unc-119(+)]spo-11(ok79) IV/nT1 [qIs51] (IV;V); sun-1(ok1282) V/nT1 [qIs51] (IV;V) | This paper | UV141 |
C. elegans: [gfp::lmn-1]; histone::mCherry: lmn-1(tm1502)I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II; histone::mCherry IV | This paper | UV142 |
C. elegans: [gfp::lmn-1S32,403A]; histone::mCherry: lmn-1(tm1502)I; jfSi72[Plmn-1S(32, 403)A::gfp cb-unc-119(+)] II; histone::mCherry IV | This paper | UV143 |
C. elegans: [gfp::lmn-1S8A]; histone::mCherry: lmn-1(tm1502)I; jfSi89[Plmn-1S(21,22,24,32,397,398,403,405)A::gfp cb-unc-119(+)] II; histone::mCherry | This paper | UV144 |
C. elegans: [gfp::lmn-1]; [sun-1::gfp] ced-3(n717): lmn-1(tm1502) I; jfSi68[Plmn-1::gfp cb-unc-119(+)] II; jfSi26[Psun-1::gfp cb-unc-119(+)] ced-3(n717) IV; sun-1(ok1282) V | This paper | UV147 |
C. elegans: [gfp::lmn-1S8A]; [sun-1S10A::gfp] ced-3(n717): lmn-1(tm1502) I; jfSi89[Plmn-1S(21,22,24,32,397,398,403,405)A::GFPcb-unc-119(+)] II; jfSi49[Psun-1::gfp S(8, 12, 16, 24, 36, 43, 58, 62, 69, 78)A cb-unc-119(+)] ced-3(n717) IV; sun-1 (ok1282) V | This paper | UV148 |
C. elegans: [sun-1S10A::gfp] ced-3(n717): jfSi49[Psun-1::gfp S(8, 12, 16, 24, 36, 43, 58, 62, 69, 78)A cb-unc-119(+)] ced-3(n717) IV; sun-1 (ok1282) V | This paper | UV146 |
Oligonucleotides | ||
For primers see Table S3 | N/A | N/A |
Recombinant DNA | ||
Destination vector pDESTttTi5605[R4-R3] for MOS insertion on Chromosome II (was a gift from Erik Jorgensen) | (Frøkjaer-Jensen et al., 2008) | pCFJ150 Addgene plasmid # 19329 |
Destination vector pCFJ178 - cxTi10882_MCS for cxTi10882 targetting region for MOS insertion on Chromosome IV (was a gift from Erik Jorgensen) |
(Frøkjaer-Jensen et al., 2008) | pCFJ178 Addgene plasmid # 19331 |
Co-injection marker Pmyo-2::mCherry::unc-54utr (was a gift from Erik Jorgensen) | (Frøkjaer-Jensen et al., 2008) | pCFJ90 Addgene plasmid # 19327 |
Co-injection marker pGH8 - pRAB-3::mCherry::unc-54utr (was a gift from Erik Jorgensen) | (Frøkjaer-Jensen et al., 2008) | pGH8 Addgene plasmid # 19359 |
MOS transposase Pglh-2::MosTase::glh-2utr (was a gift from Erik Jorgensen) | Frøkjaer-Jensen et al., 2008) | pJL43.1 Addgene plasmid # 19332 |
Entry clone for Gateway pDONR™221 (lmn-1 CDS was cloned in this vector- also versions with point mutations) | Multistite Gateway ® Kit, Thermo Fischer Scientific | Cat# 12537-023 |
pDONR™ P4-P1R (the lmn-1 5’ UTR with and without GFP was cloned in this vector) | Multistite Gateway ® Kit, Thermo Fischer Scientific | Cat# 12537-023 |
pDONRTM P2r-P3 (the lmn-1 3’UTR was cloned in this vector) | Multistite Gateway ® Kit, Thermo Fischer Scientific | Cat# 12537-023 |
Minigene from IDT for generating the lmn-18A containing the whole CDS of lmn-1(S21,22,24,32,397,398,403,405A) | This paper | N/A |
Plmn-1_gfp::lmn-1_lmn-1 3’UTR in pCFJ150 | This paper | N/A |
Plmn-1_gfp::lmn-1(S8A)_lmn-1 3’UTR in pCFJ150 | This paper | N/A |
Plmn-1_gfp::lmn-1(S32,403A)_lmn-1 3’UTR in pCFJ150 | This paper | N/A |
Plmn-1_lmn-1(S32,403,470)_lmn-1 3’UTR in pCFJ150 | This paper | N/A |
Plmn-1_lmn-1_lmn-1 3’UTR in pCFJ150 | This paper | N/A |
Minigene from IDT for generating the SUN-1(10A) containing part of the CDS of SUN-1(8,12,16,24,36,43,58,62,69,78A) | This paper | N/A |
Psun-1::sun-1::eGFP::sun-1 3’UTR | Penkner et al., 2009 | N/A |
Peft-3::cas9-SV40_NLS::tbb-2 3'UTR was a gift from John Calarco | (Friedland et al., 2013) | Addgene plasmid # 46168 |
pRB1017 was a gift from Andrew Fire | (Arribere et al., 2014) | Addgene plasmid # 59936 |
Software and Algorithms | ||
ImageJ version 2.0.0 Plugins used: StackReg; Manual Tracking |
NIH | https://imagej.nih.gov/ij/ |
SoftWorx Suite | Applied Precision | N/A |
GraphPad Prism 6 | GraphPad | N/A |
Adobe Photoshop CC2015 | Adobe | N/A |
Adobe Illustrator CS6 | Adobe | N/A |
MaxQuant Software 1.5.6.0 | MaxQuant | www.coxdocs.org |
GPS SUMO SP 2.0 | The CUCKOO Workgroup | http://sumosp.biocuckoo.org/online.php |