TABLE 5.
Subset | n | Rank | Phylum | Family | Genus | Base mean | log2 Fold Change | Padj |
---|---|---|---|---|---|---|---|---|
African American | 93 | 65 | Proteobacteria | Pasteurellaceae | Haemophilus | 4.29 | −0.34 | .99 |
5 | Firmicutes | Veillonellaceae | Dialister | 2.71 | −1.81 | .33 | ||
6 | Firmicutes | Lachnospiraceae | Dorea | 23.60 | −1.22 | .62 | ||
56 | Firmicutes | Clostridiaceae | Clostridium | 8.52 | 0.42 | .99 | ||
| ||||||||
Non-African American | 123 | 2 | Proteobacteria | Pasteurellaceae | Haemophilus | 16.10 | −2.37 | .02 |
4 | Firmicutes | Veillonellaceae | Dialister | 1.03 | −2.39 | .12 | ||
6 | Firmicutes | Lachnospiraceae | Dorea | 22.00 | −1.95 | .16 | ||
7 | Firmicutes | Clostridiaceae | Clostridium | 45.88 | −1.49 | .19 | ||
| ||||||||
Solid Food | 98 | 11 | Proteobacteria | Pasteurellaceae | Haemophilus | 6.97 | −1.40 | .41 |
26 | Firmicutes | Veillonellaceae | Dialister | 0.94 | −0.94 | .94 | ||
12 | Firmicutes | Lachnospiraceae | Dorea | 21.04 | −1.17 | .42 | ||
27 | Firmicutes | Clostridiaceae | Clostridium | 8.41 | 0.58 | .94 | ||
| ||||||||
No solid food | 118 | 1 | Proteobacteria | Pasteurellaceae | Haemophilus | 14.68 | −2.33 | .15 |
3 | Firmicutes | Veillonellaceae | Dialister | 3.00 | −2.35 | .17 | ||
4 | Firmicutes | Lachnospiraceae | Dorea | 24.91 | −2.06 | .17 | ||
5 | Firmicutes | Clostridiaceae | Clostridium | 39.45 | −1.54 | .27 |