Table 2. Purity measurements for different homogenization methods and single versus pooled tendon samples.
(A) RNA purity (260/280 ratio), concentration, and RIN measurements are poor following Polytron or Spex freezer mill homogenization methods | ||||||
---|---|---|---|---|---|---|
Sample | Number of tendons | Conc. (ng/μl) | Homogenization method | RIN | 260/280 | 260/230 |
8wk poly 1 | One | 32.5 | Polytron | None | 1.57 | 0.49 |
8wk poly 2 | One | 51 | Polytron | 2.5 | 1.62 | 0.34 |
8wk poly 3 | Three | 71.2 | Polytron | 2.6 | 1.58 | 0.33 |
8wk poly 4 | Three | 29.4 | Polytron | None | 1.56 | 0.65 |
8wk spex 1 | Four | 170 | Spex freezer mill | 2.4 | 1.44 | 0.22 |
8wk spex 2 | Four | 80 | Spex freezer mill | 2.4 | 1.47 | 0.25 |
8wk spex 3 | One | 4.4 | Spex freezer mill | 2.3 | 1.44 | 0.31 |
8wk spex 4 | One | 4.7 | Spex freezer mill | None | 2.26 | 0.01 |