Table 1. Fusion transcripts detected using FusionCatcher.
5′-Chr | 3′- Chr | 5′- Partner gene | 3′- Partner gene | Fusion sequence |
---|---|---|---|---|
17 | 17 | C17orf107 | GP1BA | GAAGAGATGGTGATAAAGACGCAGTTCCTCGTTCTTCCCCACACCCCTGC*CTGGAGCTGCAG AGGGGACGGCAAGTGACAGTGCCCCGGGCCTGGCTGCT |
2 | 6 | EPC2 | PHF1 |
TGCCAAAGGTTACTCCCAGCAGTGCCATCAGCAGCATAGCAAG*GCCCCCCCAGGATGC AATGGCGCAGCCCCCCCGGCTGAGCCGC |
2 | 2 | MBD5 | EPC2 | TGAAGGCTTTATGGTTTACAGACAAGATCTTTAGAAGATAAGCACTAAAG*AGAGAACCACG AACCAGAAAGATTGGGCTTAAATGGAATAGCAGAGACAA |
19 | 19 | EIF3K | ACTN4 | AGAAGAGAGCATTAAACCCAAGAACATTGTGGAGAAGATTGACTTTGACA*ACCTTCACGGC ATGGTGCAACTCCCACCTGCGGAAGGCAGGCACACAGAT |
X | 14 | MED12 | IRF2BPL | TCTTATAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAA*CAGCAGCAGC AGCAGCAGCAGCAGCAACAACAGCTCAACCACGTTGATGG |