TABLE 1.
Genes and primers used for qPCR in this study
Gene | Primer sequence (5′–3′) |
Forward primer |
Reverse primer |
Product size (bp) | Reference | |||||
---|---|---|---|---|---|---|---|---|---|---|
Forward | Reverse | BPa | GCb | TMc | BP | GC | TM | |||
lasI | TGTTCAAGGAGCGCAAAGG | ATGGCGAAACGGCTGAGTT | 19 | 52.6 | 62.4 | 19 | 52.6 | 63 | 244 | 58 |
lasR | AGCGACCTTGGATTCTCGAAG | CGAAGAACTCGTGCTGCTTTC | 21 | 52.4 | 63 | 21 | 52.4 | 62.5 | 226 | 58 |
rhlI | TGCTCTCTGAATCGCTGGAA | GTTTGCGGATGGTCGAACTG | 20 | 50 | 59.1 | 20 | 55 | 59.83 | 154 | 58 |
rhlR | TTGCTGAGCGTGCTTTCC | AGGATGATGGCGATTTCCC | 19 | 52.6 | 62.6 | 19 | 52.6 | 62.1 | 228 | 58 |
rpsLd | CCTCGTACATCGGTGGTGAAG | CCCTGCTTACGGTCTTTGACAC | 21 | 57.1 | 62.8 | 22 | 54.5 | 63.1 | 148 | 59 |
proDd | GGGCGAAGAAGGAAATGGTC | CAGGTGGCGTAGGTAGAGAA | 20 | 55 | 63.1 | 20 | 55 | 58 | 178 | 60 |
BP, primer length (base pairs).
GC, G-C content of primer.
TM, melting temperature of primer.
Reference/endogenous control gene.