Table 1.
QTLs associated with host bacterial loads in spleen and liver post S. Typhimurium infection
| QTL | Organ | Chr | -log10(P) | Peak position (Mb) | Sig. level | Interval (Mb) | Width (Mb) | All type genes | Protein coding genes | RNA genes | Unclassified genes | Unclassified non-coding RNA genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Stsl1 | spleen | 8 | 4.7 | 12.5 | 0.95 | 11.3–17.0 | 5.7 | 144 | 50 | 68 | 23 | 3 |
| Stsl2 | spleen | 10 | 3.8 | 52.3 | 0.9 | 46.4–54.0 | 7.6 | 62 | 24 | 30 | 6 | 2 |
| Stsl3a | spleen | 1 | 3.3 | 83.9 | 0.5 | 77.5–95.9 | 21.8 | 503 | 226 | 200 | 66 | 11 |
| Stsl3b | spleen | 1 | 3.0 | 79.2 | 0.5 | 74.1–81.8 | ||||||
| Stsl4 | liver | 6 | 3.2 | 81.2 | 0.5 | 77.1–90.0 | 12.9 | 336 | 142 | 128 | 59 | 7 |
| Stsl5 | liver | 17 | 3.1 | 84.8 | 0.5 | 80.5–91.1 | 10.6 | 177 | 61 | 94 | 12 | 10 |
QTL nomenclature, target organ, chromosome (Chr), negative log10 p-value (−log10(P)), peak position (in Mb, build mm9), genome-wide significance level (Sig. level), QTL position and Width (in Mb, build mm9) are given. Numbers of total genes, protein coding genes, RNA genes, unclassified genes and unclassified non-coding RNA genes within each QTL interval are also presented