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. 2018 Apr 23;9(4):225. doi: 10.3390/genes9040225

Table 3.

Energy-conserving systems and related proteins predicted for the SAOB C. ultunense strain Esp, C. ultunense strain BST, T. acetatoxydans strain Re1, Th. Phaeum strain PB, P. lettingae strain TMO, and S. schinki strain Sp3 [28,30,32].

T. acetatoxydans Re1 (Mesophilic) S. schinkii Sp3 (Mesophilic) C. ultunense Strain Esp (BST) (Mesophilic) T. phaeum PB (Thermophilic) P. lettingae TMO (Thermophilic)
Rnf complex (rnfCDGEAB) TepiRe1_2026-_2031 SSCH_420047-420053 CUESP_2612-2617
(AZSU01_50145-50150)
- Tlet_0286-_0291
NQR complex (nqrBCDEF) - - CUESP_0375-0379
(AZSU01_10374-10378)
- Tlet_0865-0869
NADH Ferredoxin-depending [Fe-Fe] hydrogenase TepiRe1_2033-2037
TepiRe1_2699-2701
SSCH_90017-19
SSCH_210008-10
SSCH_60009-11
SSCH_1120014-15
CUESP_2849-2850
(AZSU_01_60160-60162)
Tph_18440-_18460 Tlet_0952-0957
Tlet_1518-1522
Ech hydrogenase (echABCDEF) - SSCH_170021-26 - Tph_21310-_21360 -
Periplasmic [Ni-Fe] hydrogenase (Maturation proteins) - SSCH_30031-_30033
(SSCH_60028-_60030)
- Tph_06350-_06370
(Tph_09180-_09210)
-
Cytoplasmic [Ni-Fe] hydrogenase - SSCH_370001-6 - Tph_26880-_26930 -
Ion-translocating Ferredoxin-NADH oxidoreductase/heterodisulfide reductase complex - SSCH_160001-8 - - -
Cytoplasmic formate dehydrogenase - SSCH_1520002-3 CUESP_2852-2856
(AZSU01_60163-60167)
Tph_27280-_27290
Tph_18420-_18430
-
Membrane bound formate dehydrogenase - SSCH_1490003-6 - Tph_15370-_15400 -
Formate hydrogen lyase - - - Tph_26250-26370 -
Electron transfer flavoprotein (EtfAB) TepiRe1_2532-2533 - CUESP_1366-1368
(AZSU01_20759-20761)
- Tlet_1692-1694
Tlet_1832-1833
ATP synthase - SSCH_240003-240010 CUESP_1228-1235
(AZSU_20626-20633)
Tph_27340-27360 Tlet_0160-0167
Membrane bound Na/H-PPase TepiRe1_2120 SSCH_1440001 CUESP_0504
(AZSU01_10499)
Tph_08020 Tlet_1947
Tlet_1318
Tlet_2017
Ferredoxins TepRe1_0333
TepRe1_0615
TepRe1_1978
SSCH_100042
SSCH_450007
SSCH_530010
SSCH_760007
SSCH_1120013
CUESP_0098 CUESP_0771
CUESP_1024
CUESP_1759
CUESP_2851 (AZSU01_10096 AZSU01_20179 AZSU01_30304 AZSU01_60162)
Tph_08140
Tph_08570
Tph_09550
Tph_11190
Tph_15740
Tph_17670
Tph_18150
Tph_24780
Tlet_0408
Tlet_0921
Tlet_0956
Tlet_1345
Tlet_1467
Tlet_1761
Tlet_2059
Rubredoxin TepRe1_0396 SSCH_180038 CUESP_0131 (AZSU01_10127) Thp_07990
Thp_23390
Thp_23400
Tlet_1612
Flavodoxin - - CUESP_0726
CUESP_1387
CUESP_2600
CUESP_0610 (AZSU01_20134 AZSU01_20779 AZSU01_50133)
Tph_01330
Thp_21710
Tlet_0030
Tlet_1248
Tlet_1568
Tlet_1577
Cytochrome - - - - Tlet_1388