Table 3.
Major technological advances that have accelerated the adoption of Systems Biology and Systems Medicine.
| Technology | Methods/techniques | Examples |
|---|---|---|
| DNA Microarrays | Transcriptomics, exome capture, epigenetics, small RNA expression, genotyping, metagenomics. Transcriptomics now replaced by “RNA-sequencing” and genotyping increasingly replaced by WGS (see below) |
26 |
| Sequencing (Next-Generation, nanopore, or long-read sequencers; Single-molecule sequencing) |
Whole genome sequencing (WGS), exome analysis, epigenetics, whole transcriptome analysis (RNA-sequencing), small RNA sequencing, GWAS, metagenomics | 15, 27–31 |
| Mass spectrometry | Proteomics, metabolomics, mass spectrometry imaging, lipidomics, glycomics, protein-protein interactions, post-translational modification analysis | 32–39 |
| Microfluidics | Single cell assays including gene expression, whole genome sequencing, protein analysis and epigenome analysis | 13, 40–44 |
| Flow and Mass Cytometry | Single cell protein analysis | 45–48 |
| Genome editing technology | Genome-wide gene deletion assays, screening assays | 31,49,50 |
| iPSC technology | In vitro models for diseases, drug screening | 51–56 |