Table 2. Predicted CTL epitopes from (HPV31 to HPV68) E6 protein.
Residue No |
Peptide Sequence | MHC Binding Affinity | Rescale Binding Affinity | C-terminal Cleavage Affinity | Transport Affinity | Prediction Score | MHC-I Binding |
---|---|---|---|---|---|---|---|
15 | LSSALEIPY | 0.4620 | 1.9614 | 0.6850 | 2.7980 | 2.2040 | Yes |
37 | LTETEVLDF | 0.5417 | 2.3000 | 0.8056 | 2.3240 | 2.5371 | Yes |
39 | ETEVLDFAF | 0.2203 | 0.9355 | 0.0724 | 2.1750 | 1.0551 | Yes |
47 | FTDLTIVYR | 0.1915 | 0.8130 | 0.8104 | 1.3460 | 1.0019 | Yes |
73 | VSEFRWYRY | 0.5615 | 2.3842 | 2.3842 | 2.9840 | 2.6666 | Yes |
39 | RSEVYDFAF | 0.2390 | 1.0147 | 0.1258 | 2.6260 | 1.1649 | Yes |
73 | ISEYRHYNY | 0.5954 | 2.5278 | 0.8555 | 2.9450 | 2.8033 | Yes |
2 | FQDPAERPY | 0.2014 | 0.8549 | 0.8643 | 2.7650 | 1.1228 | Yes |
73 | ISEYRWYRY | 0.5572 | 2.3657 | 0.8670 | 2.9450 | 2.6430 | Yes |
41 | QTEVYEFAF | 0.3068 | 1.3027 | 0.0842 | 2.3330 | 1.4320 | Yes |
45 | YEFAFSDLY | 0.1254 | 0.5323 | 0.9668 | 2.9280 | 0.8237 | Yes |
49 | FSDLYVVYR | 0.1983 | 0.8419 | 0.8143 | 1.4080 | 1.0345 | Yes |
72 | YAKIRELRY | 0.2013 | 0.8546 | 0.9407 | 2.8500 | 1.1382 | Yes |
81 | YSDSVYATT | 0.3351 | 1.4228 | 0.0616 | 0.9130 | 1.3863 | Yes |
95 | NTKLYNLLI | 0.1752 | 0.7439 | 0.7623 | 0.5580 | 0.8862 | Yes |
18 | CTELNTSLQ | 0.2302 | 0.9776 | 0.0277 | -0.2640 | 0.9686 | Yes |
37 | ATLERTEVY | 0.3216 | 1.3654 | 0.9669 | 3.1660 | 1.6687 | Yes |
41 | RTEVYQFAF | 0.3261 | 1.3848 | 0.2831 | 2.4460 | 1.5495 | Yes |
72 | YSRIRELRY | 0.3333 | 1.4151 | 0.8846 | 2.8890 | 1.6922 | Yes |
95 | NTELYNLLI | 0.4589 | 1.9483 | 0.8040 | 0.4160 | 2.0897 | Yes |
39 | RADVYNVAF | 0.2034 | 0.8635 | 0.3223 | 2.6480 | 1.0442 | Yes |
89 | EAITKKSLY | 0.1378 | 0.5852 | 0.9040 | 2.8900 | 0.8653 | Yes |
47 | FTDLRIVYR | 0.1636 | 0.6948 | 0.5907 | 1.2400 | 0.8454 | Yes |
73 | ISEYRHYQY | 0.5593 | 2.3746 | 0.9645 | 2.9450 | 2.6666 | Yes |
76 | YRHYQYSLY | 0.1668 | 0.7084 | 0.9696 | 2.9740 | 1.0025 | Yes |
73 | YSKVRKYRY | 0.3031 | 1.2871 | 0.8705 | 2.8380 | 1.5596 | Yes |
99 | LCDLLIRCY | 0.1708 | 0.7250 | 0.8642 | 2.7240 | 0.9909 | Yes |
35 | KTLQRSEVY | 0.2565 | 1.0890 | 0.8691 | 3.1290 | 1.3758 | Yes |
39 | RSEVYDFVF | 0.2152 | 0.9138 | 0.2751 | 2.6260 | 1.0864 | Yes |
68 | RLLSKISEY | 0.1342 | 0.5698 | 0.9665 | 3.2540 | 0.8774 | Yes |
73 | ISEYRHYNY | 0.5954 | 2.5278 | 0.9588 | 2.9450 | 2.8188 | Yes |
76 | YRHYNYSLY | 0.1608 | 0.6829 | 0.9673 | 2.9740 | 0.9767 | Yes |
20 | TLDTTLHDV | 0.1793 | 0.7613 | 0.7970 | 0.2690 | 0.8943 | Yes |
41 | RTEVYEFAF | 0.2257 | 0.9584 | 0.1397 | 2.5640 | 1.1075 | Yes |
49 | FSDLCVVYR | 0.1559 | 0.6619 | 0.2967 | 1.4080 | 0.7768 | Yes |
72 | YAKIRELRY | 0.2013 | 0.8546 | 0.9002 | 2.8500 | 1.1322 | Yes |
91 | ETITNTKLY | 0.3233 | 1.3728 | 0.8601 | 2.8160 | 1.6426 | Yes |
95 | NTKLYNLLI | 0.1752 | 0.7439 | 0.8751 | 0.5580 | 0.9031 | Yes |