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. 2018 Apr 16;84(9):e02766-17. doi: 10.1128/AEM.02766-17

TABLE 1.

Class 1 integron GC arrays and their structures detected in WWTPs, based on a clone librarya

GC array GC structure Source description Sample(s) in which GC was detected No. of GCs
aacA4-ereA1 graphic file with name zam009188473007a.jpg This study QPE2 1
blaOXA-101-orf-aadA2 graphic file with name zam009188473007b.jpg This study LYE1 1
trm-aacA4-ereA1 graphic file with name zam009188473007c.jpg This study QPI1 1
blaOXA-101-orf-aadA2 graphic file with name zam009188473007d.jpg This study LYE1 1
orf-aadA2-blaOXA-129-linF graphic file with name zam009188473007e.jpg This study LYI1 1
blaOXA-21-aadA2 graphic file with name zam009188473007f.jpg This study LYI1 1
aacA4-ereA-aadA2 graphic file with name zam009188473007g.jpg This study LYA2 1
aadA2-linF graphic file with name zam009188473007h.jpg This study QPI1, JME1 2
arr2-aacA4 graphic file with name zam009188473007i.jpg EU340416; 63 LYI1 1
blaOXA-10-aadA1 graphic file with name zam009188473007j.jpg This study QPI1, JME2 2
catB8-blaOXA-1-aadA1 graphic file with name zam009188473007k.jpg This study QPI1 1
blaVEB-1-aadB graphic file with name zam009188473007l.jpg This study LYI1 1
dfrA14-nit1-nit2 graphic file with name zam009188473007m.jpg This study QPA1 1
arr2-dfrA27 graphic file with name zam009188473007n.jpg This study JME1 1
aadA16-orfD graphic file with name zam009188473007o.jpg This study JME1 1
qacE2-orfD graphic file with name zam009188473007p.jpg DQ462520; 64 LYA1, LYE1 3
a

The circle in the gene cassette (GC) structure represents the attC site, where the base in red indicates a variant in the conserved region. Nucleotide sequences with asterisks indicate the inverted repeats. Samples are named on the basis of the abbreviation for the WWTPs and sample types. For example, “QPE” refers to the effluent sample (E) from of Qianpu (QP) wastewater treatment plant. LY, Longyan; JM, Jimei.