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. 2018 May 2;19:319. doi: 10.1186/s12864-018-4706-x

Table 8.

Gene related to osmotic regulation system in response to low temperature

Gene ID CP1 log2FC CP1 regulated CP2 log2FC CP2 regulated CP3 log2FC CP3 regulated Gene description
Starch-degrading genes c106047.graph_c0 1.82 normal 2.10 up 0.57 normal Beta-amylase
c111660.graph_c0 4.57 up 4.51 up 4.83 up Beta-amylase
c98302.graph_c0 3.25 up 3.61 up 1.87 up Beta-amylase
c111420.graph_c0 2.83 up 3.22 up 1.81 up Beta-amylase
c111420.graph_c1 2.83 up 3.22 up 1.58 up Beta-amylase
c102389.graph_c0 2.43 up 1.99 up 0.97 normal Probable alpha-amylase
c116071.graph_c0 2.01 up 1.94 normal −0.90 normal Alpha-amylase
c116145.graph_c0 1.93 up 2.06 up 0.02 normal Alpha-amylase
Cellulose-degrading genes c111098.graph_c0 2.59 up 2.32 up 1.37 normal Beta glucosidase 41 isoform 3
c91317.graph_c0 2.74 up 2.02 normal 0.98 normal Raucaffricine-O-beta-D- glucosidase
c108565.graph_c1 1.88 up 1.43 normal 0.26 normal lysosomal beta glucosidase-like
c96136.graph_c0 2.96 up 2.90 up 0.33 normal Beta-glucosidase 18
c106631.graph_c0 −2.07 down −1.52 normal 0.23 normal Strictosidine-O-beta-D- glucosidase
c104722.graph_c1 −2.20 down −2.06 normal −0.81 normal Probable beta-D-xylosidase 5
c93973.graph_c0 −3.35 down −1.34 normal −0.06 normal lysosomal beta glucosidase-like isoform X1
c98430.graph_c0 −1.82 down −1.98 normal −0.44 normal Beta-glucosidase 18
c98430.graph_c1 −2.07 down −2.41 down −0.82 normal beta-glucosidase 18 isoform X1
c104480.graph_c0 0.12 normal 2.23 up 0.56 normal Probable beta-D-xylosidase 5
c112478.graph_c0 1.49 normal 1.12 normal 1.12 up Beta-glucosidase 11
c114139.graph_c0 −1.23 normal −1.96 normal −1.23 down Beta-glucosidase 18
SPS c114821.graph_c1 3.09 up 3.44 up 0.34 normal sucrose phosphate synthase
c114715.graph_c0 2.56 up 2.48 up −0.88 normal sucrose phosphate synthase
c114821.graph_c0 3.67 up 4.00 up 0.92 normal sucrose phosphate synthase
SS c103323.graph_c0 −1.84 normal −1.53 normal 1.11 up Sucrose synthase 3
TPS c102854.graph_c0 −4.99 down −2.01 normal −1.08 normal Probable alpha,alpha-trehalose-
phosphate synthase
c104136.graph_c0 −4.61 down −1.25 normal −0.91 normal Probable alpha,alpha-trehalose-
phosphate synthase
c115624.graph_c0 −2.17 down −0.23 normal −0.63 normal trehalose-6-phosphate synthase
c92114.graph_c0 2.38 normal 3.25 up – – trehalose-7-phosphate synthase
c112854.graph_c0 −3.03 down −1.39 normal −1.34 down Probable alpha,alpha-trehalose-
phosphate synthase
c113270.graph_c0 −2.41 down 1.08 normal 0.44 normal Probable alpha,alpha-trehalose-
phosphate synthase
c93906.graph_c0 −4.25 down −2.27 normal −0.82 normal Probable alpha,alpha-trehalose-
phosphate synthase
c99330.graph_c0 3.86 up 3.89 up – – Alpha,alpha-trehalose-
phosphate synthase
c107046.graph_c1 −1.62 normal −2.72 down −0.88 normal trehalose 6-phosphate synthase
c108202.graph_c0 −3.46 down 0.56 normal −0.17 normal Probable alpha,alpha-trehalose-
phosphate synthase
c94647.graph_c0 2.41 up 1.49 normal – – Alpha,alpha-trehalose-
phosphate synthase
c86304.graph_c0 −3.60 down −1.52 normal −0.57 normal Probable alpha,alpha-trehalose-
phosphate synthase
TPP c110653.graph_c0 3.26 up 5.87 up 5.00 up trehalose-phosphate phosphatase
c116316.graph_c0 1.99 up 2.15 up 1.00 normal trehalose-phosphate phosphatase
c104330.graph_c0 3.07 up 3.06 up 2.73 up trehalose-phosphate phosphatase
Raffinose synthase genes c80434.graph_c0 2.58 up 3.34 up 1.41 normal Galactinol synthase
c98797.graph_c0 4.00 up 5.46 up 1.90 up Galactinol synthase
c81587.graph_c0 2.44 up 2.55 up 0.97 normal Galactinol synthase
c115834.graph_c0 4.05 up 7.49 up 4.99 up Probable galactinol--sucrose galactosyltransferase
c115556.graph_c0 −4.49 down 1.01 normal 1.97 up Probable galactinol--sucrose galactosyltransferase
galM c98143.graph_c0 −1.78 down −1.26 normal −0.44 normal Aldose 1-epimerase
galA c110075.graph_c0 −2.00 down −2.54 down −0.43 normal Alpha-galactosidase
P5CS c110924.graph_c0 2.76 up 2.95 up 0.74 normal pyrroline-5-carboxylate synthetase