Table 7.
Predicted CTL epitopes.
| No. | Residue number | Peptide sequence | Predicted MHC binding affinity | Rescale binding affinity | C-terminal cleavage affinity | Transport affinity | Prediction score* | MHC ligand | Immunogenicity Using IEDB | Conservancy (%) | Allergenicity |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 438 | STVAYEDLY | 0.5117 | 2.1724 | 0.8673 | 3.081 | 2.4565 | YES | 0.15566 | 93.48 | No |
| 2 | 573 | KTALGSYPY | 0.4167 | 1.7691 | 0.9023 | 3.128 | 2.0609 | YES | −0.13079 | 45.65 | No |
| 3 | 648 | WVASNGTSY | 0.395 | 1.6771 | 0.8945 | 3.101 | 1.9663 | YES | −0.19207 | 76.09 | No |
| 4 | 334 | VSDNEGHIL | 0.3292 | 1.3978 | 0.518 | 0.89 | 1.52 | YES | 0.23515 | 82.61 | No |
| 5 | 5 | YSSSFILII | 0.3231 | 1.3719 | 0.5421 | 0.384 | 1.4724 | YES | 0.08751 | 2.17 | No |
| 6 | 517 | VTDLTTKTV | 0.2346 | 0.996 | 0.9599 | 0.188 | 1.1493 | YES | −0.08894 | 60.87 | No |
| 7 | 299 | QIGSIPFTY | 0.1839 | 0.7807 | 0.972 | 2.764 | 1.0647 | YES | 0.08517 | 91.30 | No |
| 8 | 619 | ILVPGAWKY | 0.175 | 0.7431 | 0.9744 | 3.199 | 1.0492 | YES | 0.13301 | 95.65 | No |
| 9 | 99 | NSDSSSNAT | 0.2342 | 0.9944 | 0.1875 | −0.663 | 0.9893 | YES | −0.4587 | 54.35 | No |
| 10 | 526 | SSSDLNLGI | 0.1834 | 0.7787 | 0.9216 | 0.671 | 0.9505 | YES | −0.03783 | 56.52 | YES |
| 11 | 609 | YLDSNNFPW | 0.17 | 0.7219 | 0.8792 | 0.809 | 0.8942 | YES | −0.07934 | 93.48 | No |
| 12 | 653 | GTSYKDWYK | 0.1626 | 0.6905 | 0.5908 | 0.401 | 0.7991 | YES | −0.06176 | 78.26 | No |
Residues in Bold indicate that were also predicted as antigenic sites in linear B-cell epitopes.