. 2018 May 2;19:320. doi: 10.1186/s12864-018-4709-7

Table 3.

Short copy number variations are found in repetitive genomic regions

Isolates	WSU107–0081 (wt, Arbutus) normal euploid	WSU107–0086 (wt, Rhododendron) normal euploid	Pr-106 (wt, bay) normal euploid	WSU107–0057 (wt, Rhododendron) sCNV euploid	WSU108–0021 (wt, Viburnum) sCNV euploid	Overlap between WSU107–0057 and 108–0021
Total sCNV (average size)	71 (1888 bp)	71 (3021 bp)	102 (1751 bp)	357 (1255 bp)	446 (988 bp)	275
sCNV at multicopy regions	62 (87.3%)	68 (96%)	96 (94%)	319 (89.4%)	393 (88.1%)	267
sCNVs at TEs^a	18 (25.3%)	6 (8.5%)	32 (31%)^a	135 (37.8%)^a	169 (37.9%)^a	97
sCNVs at tandem repeat regions^a	15 (21.5%)^a	18 (25.3%)^a	10 (9.8%)^a	58 (16.2%)^a	70 (15.7%)^a	51

^a A randomization test showed that observed sCNVs at TEs or tandem repeats were significantly more frequent than expected by chance (p < 0.01)