Table 5. The MIDs for the C. glutamicum metabolic network calculated by FluxPyt and OpenFLUX.
Measured MIDs (Quek et al., 2009) | FluxPyt | OpenFLUX | ||
---|---|---|---|---|
Ala 260 | M+0 | 0.5085 | 0.5096 | 0.5095 |
M+1 | 0.3529 | 0.3537 | 0.3538 | |
M+2 | 0.1058 | 0.1062 | 0.1063 | |
Val 288 | M+0 | 0.3455 | 0.3472 | 0.3477 |
M+1 | 0.3983 | 0.3979 | 0.3978 | |
M+2 | 0.1845 | 0.1840 | 0.1838 | |
Thr 404 | M+0 | 0.3330 | 0.3342 | 0.3341 |
M+1 | 0.3764 | 0.3750 | 0.3758 | |
M+2 | 0.1957 | 0.1958 | 0.1957 | |
Asp 418 | M+0 | 0.3343 | 0.3336 | 0.3334 |
M+1 | 0.3732 | 0.3743 | 0.3750 | |
M+2 | 0.1955 | 0.1962 | 0.1961 | |
Glu 432 | M+0 | 0.2469 | 0.2499 | 0.2493 |
M+1 | 0.3648 | 0.3652 | 0.3657 | |
M+2 | 0.2412 | 0.2392 | 0.2396 | |
Ser 390 | M+0 | 0.4497 | 0.4483 | 0.4486 |
M+1 | 0.3576 | 0.3582 | 0.3581 | |
M+2 | 0.1428 | 0.1437 | 0.1435 | |
Phe 336 | M+0 | 0.2712 | 0.2736 | 0.2736 |
M+1 | 0.3816 | 0.3812 | 0.3814 | |
M+2 | 0.2282 | 0.2282 | 0.2283 | |
Gly 246 | M+0 | 0.7407 | 0.7416 | 0.7416 |
M+1 | 0.1845 | 0.1852 | 0.1852 | |
Tyr 466 | M+0 | 0.2344 | 0.2356 | 0.2356 |
M+1 | 0.3530 | 0.3560 | 0.3561 | |
M+2 | 0.2423 | 0.2448 | 0.2448 | |
Tre 361 | M+0 | 0.0613 | 0.0618 | 0.0618 |
M+1 | 0.6040 | 0.6059 | 0.6060 | |
M+2 | 0.2070 | 0.2071 | 0.2070 | |
SSR | 690 | 701 |