Table 3.

Significant SNPs associated with social average daily gain (sADG) in a Landrace nucleus herd

SSC1)	SNP	Position2)	MAF	FDR	−log10 (p-value)	Gene	Distance3) (bp)
6	ALGA0119254	124,329,498	0.19	0.16	4.7	ELTD1	−190,899
6	MARC0099561	124,344,308	0.19	0.15	4.8	ELTD1	−176,089
6	ALGA0114621	124,359,854	0.19	0.15	5.1	ELTD1	−160,543
6	ASGA0029469	124,767,859	0.19	0.15	4.9	IFI44	−22,198
6	INRA0022326	124,909,803	0.19	0.15	4.9	PTGFR	within

SSC, Sus scrofa chromosome; SNP, single nucleotide polymorphism; MAF, minor allele frequency; FDR, false discovery rate; ELTD1, EGF latrophilin and seven transmembrane domain-containing protein 1; IFI44, interferon-induced protein 44; PTGFR, prostaglandin F2α receptor.

¹⁾SNPs chromosome location as mapped on Sus scrofa Build 10.2 assembly, annotation release 104.

²⁾SNP position derived from Sus scrofa Build 10.2 assembly, annotation release 104.

³⁾Positive value denotes the gene located downstream of the SNP, negative value denotes the gene located upstream of the SNP.