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. 2018 May 4;13(5):e0193831. doi: 10.1371/journal.pone.0193831

Table 1. Summarizes the proteins of watery saliva of S. furcifera identified by LC-MS/MS.

Protein identification No. of unique peptidesa Protein domainb THMHHc TargetPd SignalPe Function group
Cytochrome c oxidase subunit 1 22 Cytochrome C and Quinol oxidase polypeptide I 12 S Yes Oxidoreductases
NADH-ubiquinone oxidoreductase chain 6 2 plastoquinone oxidoreductase chain 6 4 S Yes Oxidoreductases
NADH-ubiquinone oxidoreductase chain 3 3 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 3 S Yes Oxidoreductases
NADH-ubiquinone oxidoreductase chain 2 1 Proton-conducting membrane transporter 5 S Yes Oxidoreductases
Cytochrome P450 CYP419A1 1 Cytochrome P450 0 / No Oxidoreductases
Cytochrome b 3 Cytochromeb (C-terminal)/b6/petD Cytochrome b/b6/petB; Cytochrome b(N-terminal)/b6/petB 4 S No Oxidoreductases
Cytochrome c oxidase subunit 2 1 Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain 2 S No Oxidoreductases
NADH dehydrogenase subunit 6 1 / 4 S Yes Oxidoreductases
Peptidylglycine α-hydroxylating monooxygenase 1 Copper type II ascorbatedependent monooxygenase, C-terminal domain; Copper type II ascorbate-dependent monooxygenase, N-terminal domain 1 S Yes Oxidoreductases
Inosine-5'-monophosphate dehydrogenase 1 IMP dehydrogenase / GMP reductase domain; CBS domain 0 / No Oxidoreductases
Maestro heat-like repeat-containing protein family member 1 1 / 0 S No Oxidoreductases
Aldo-keto reductase 1 Aldo/keto reductase family 0 / No Oxidoreductases
Uncharacterized protein LOC100165697 1 / 0 / No Oxidoreductases
Isolate 9 chitinase 1 Glycosyl hydrolases family 18 0 M No Hydrolases
Carboxylesterase 2 Carboxylesterase family 0 S Yes Hydrolases
Non-lysosomal glucosylceramidase 1 Glycosyl-hydrolase family 116, catalytic region; beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 1 / No Hydrolases
Dicer 2 1 PAZ domain; Ribonuclease III domain 0 / No Hydrolases
Ankyrin repeat domain-containing protein 1 Ankyrin repeats (3 copies); Ankyrin repeats (many copies) 0 / No Hydrolases
Uncharacterized protein LOC105391939 isoform X3 1 Phospholipase A2 1 / No Hydrolases
Hypothetical protein D910_09660 3 Endoribonuclease XendoU 0 S No Hydrolases
Uncharacterized protein LOC100164352 1 / 0 / No Hydrolases
Hypothetical protein ANCCEY_11605 1 / 0 / No Hydrolases
Placental protein 11 1 Endoribonuclease XendoU 1 M No Hydrolases
Plancitoxin-1 isoform X1 2 Deoxyribonuclease II 1 S No Hydrolases
GA19137 isoform A 1 USP8 dimerisation domain; Rhodanese-like domain; Ubiquitin carboxyl-terminal hydrolase 0 / No Hydrolases
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase 1 GlcNAc-PI de-N-acetylase 1 S Yes Hydrolases
Ubiquitin carboxyl-terminal hydrolase 7 1 MATH domain; Ubiquitin carboxyl-terminal hydrolase; ICP0-binding domain of Ubiquitin-specific protease 7; Ubiquitin-specific protease C-terminal 0 / No Hydrolases
Uncharacterized family 31 glucosidase KIAA1161 isoform X1 1 Glycosyl hydrolases family 31 0 / No Hydrolases
Constitutive coactivator of peroxisome proliferator-activated receptor 1 / 0 / No Hydrolases
Endonuclease-reverse transcriptase 1 / 0 / No Hydrolases
Neprilysin-11-like isoform X4 1 Peptidase family M13 1 S No Peptidases
Xaa-Pro dipeptidase 1 FAST kinase-like protein, subdomain 1 0 / No Peptidases
Lon protease-like protein 1 ATP-dependent protease La (LON) substrate-binding domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain 0 M No Peptidases
Serine protease 6 1 Trypsin 1 S Yes Proteases
Stubble-2 1 Trypsin 0 / No Proteases
Activated CDC42 kinase 1 1 GTPase binding; Protein tyrosine kinase 0 / No Transferases
ATP citrate lyase isoform X1 1 ATP-grasp domain; ATP citrate lyase citrate-binding; CoA binding domain; CoA-ligase; Citrate synthase, C-terminal domain 0 / No Transferases
Reverse transcriptase 3 Reverse transcriptase (RNA-dependent DNA polymerase) 0 / No Transferases
Hypothetical protein D910_10443 1 Reverse transcriptase (RNA-dependent DNA polymerase) 0 / No Transferases
Uncharacterized protein LOC105556507 1 / 0 / No Transferases
UDP-glucuronosyltransferase 2C1 1 UDP-glucoronosyl and UDP-glucosyl transferase 1 / No Transferases
Histone-lysine N-methyltransferase SETMAR 1 / 0 / No Transferases
Protein purity of essence isoform X4 1 E3 ubiquitin-protein ligase UBR4 0 / No Transferases
RNA-directed DNA polymerase from mobile element jockey-like 1 / 0 / No Transferases
Hypothetical protein L798_09082 1 Ring finger domain;CUE domain 0 / No Transferases
FAST kinase domain-containing protein 1 1 FAST kinase-like protein, subdomain 2 0 / No Transferases
Carbonic anhydrase 2 1 Eukaryotic-type carbonic anhydrase 1 S Yes Lyases
Cytoplasmic aconitate hydratase-like 1 Aconitase family (aconitate hydratase); Aconitase C-terminal domain 0 / No Lyases
Ornithine decarboxylase 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pyridoxal-dependent decarboxylase, C-terminal sheet domain 0 / No Lyases
Sphingosine-1-phosphate lyase 1 Pyridoxal-dependent decarboxylase conserved domain 0 / No Lyases
Protein disulfide-isomerase 1 Thioredoxin 0 S Yes Isomerases
ATP-binding domain-containing protein 4 1 Diphthamide synthase; Endoribonuclease L-PSP 0 / No Ligases
CTP synthase 1 CTP synthase N-terminus; Glutamine amidotransferase class-I 1 / No Ligases
ATP synthase F0 subunit 8 3 / 1 S Yes ATP synthases
ATP synthase subunit a 1 ATP synthase A chain 5 S No ATP synthases
ATP synthase protein 8 1 ATP synthase protein 8 1 S Yes ATP synthases
Vacuolar ATP synthase subunit E 1 ATP synthase (E/31 kDa) subunit 0 / Yes ATP synthases
ATP synthase-coupling factor 6 1 Mitochondrial ATP synthase coupling factor 6 0 M No ATP synthases
Uncharacterized protein LOC100632426 1 Iron-sulphur cluster biosynthesis 0 / No ATP synthases
ATP-binding cassette sub-family G member 4-like protein 3 ABC-2 type transporter; ABC transporter 7 / No ABC transporter
ATP-binding cassette sub-family D member 2-like protein 1 ABC transporter transmembrane region 2; ABC transporter 4 / No ABC transporter
ATP-binding cassette sub-family B member 7 1 ABC transporter transmembrane region 0 M No ABC transporter
ABC protein subfamily ABCH 1 ABC transporter; ABC-2 family transporter protein 5 / No ABC transporter
Multidrug resistance-associated protein 1 isoform X1 1 ABC transporter transmembrane region; ABC transporter 16 S Yes ABC transporter
Sly1-like protein 1 Sec1 family 0 / No Endoplasmic reticulum (ER)–Glogi transporter
Uncharacterized protein LOC100165575 1 / 1 S No Ion transporter
Piezo-type mechanosensitive ion channel component 2 isoform X7 1 Piezo non-specific cation channel, R-Ras-binding domain; Piezo 31 S Yes Ion transporter
F-box/LRR-repeat protein 7 1 F-box-like; Methyl-CpG binding domain 0 / No Ion transporter
Organic cation transporter protein isoform X2 1 Sugar (and other) transporter 10 S Yes Ion transporter
Uncharacterized protein LOC105568157 1 / 0 / No Ion transporter
Golgin subfamily A member 4 1 GRIP domain 0 / No Golgi transporter
Apolipophorin 1 von Willebrand factor type D domain 0 / No Lipid transporter
Lipophorin precursor 1 Lipoprotein amino terminal region; Domain of unknown function (DUF1943); Domain of Unknown Function (DUF1081); von Willebrand factor type D domain 0 S Yes Lipid transporter
Vitellogenin 1 Lipoprotein amino terminal region; Domain of unknown function (DUF1943); von Willebrand factor type D domain 0 S Yes Lipid transporter
Uncharacterized protein LOC100119722 1 Saposin A-type domain; Saposin-like type B, region 1; Saposin-like type B, region 2 2 S Yes Lysosome transporter
Vam6/Vps39-like protein 1 CNH domain; Vacuolar sorting protein 39 domain 1; Vacuolar sorting protein 39 domain 2 0 / No Lysosome transporter
Vacuolar protein sorting-associated protein 28-like protein 1 VPS28 protein 0 / No Lysosome transporter
Run and tbc1 domain-containing protein 1 Rab-GTPase-TBC domain 0 / No Lysosome transporter
Hypothetical protein L798_05106 1 Thioredoxin 2 S Yes Protein transporter
Charged multivesicular body protein 3 1 Snf7 0 / No Vacuolar transporter
Calexcitin-1 isoform X1 1 EF hand; Deoxyribonuclease II 0 S No; Calcium ion binding protein
Hypothetical protein TcasGA2_TC004855 1 LETM1-like protein 1 M No Calcium ion binding protein
EF-hand domain containing protein 1 EF hand 0 / No Calcium ion binding protein
Mucin-like protein 11 / 1 S Yes Sheath proteins
Actin 2 Actin 0 / No Cytoskeleton protein
Myosin-IIIa 1 IQ calmodulin-binding motif; Myosin head (motor domain) 0 / No Cytoskeleton protein
Kinesin light chain 1 Tetratricopeptide repeat 0 / No Cytoskeleton protein
Microtubule-actin cross-linking factor 1 isoform X4 1 Spectrin repeat; EF-hand domain pair; Growth-Arrest-Specific Protein 2 Domain 0 / No Cytoskeleton proteins
Kinesin-like protein KIF21A isoform X2 1 Kinesin motor domain; WD domain, G-beta repeat 0 / No Cytoskeleton proteins
Cordon-bleu protein-like 1 1 / 0 / No Cytoskeleton protein
Zinc finger protein 239-like 1 Zinc finger, C2H2 type; C2H2-type zinc finger 0 / No Zinc finger protein
Zinc finger matrin-type protein 1 / 0 / No Zinc finger protein
Apterous a 1 LIM domain; Homeobox domain 0 / No Transcription factors
Ecdysteroid receptor 1 Ligand-binding domain of nuclear hormone receptor; Zinc finger, C4 type (two domains) 0 / No Transcription factors
Transcriptional regulator ATRX-like 1 SNF2 family N-terminal domain; Helicase conserved C-terminal domain 0 / No Transcription factors
RNA polymerase-associated protein CTR9-like protein 1 Tetratricopeptide repeat 0 / No Transcription factors
Conserved hypothetical protein 1 Leo1-like protein 0 / No Transcription factors
Transcription initiation factor IIA subunit 1 1 Transcription factor IIA, alpha/beta subunit 0 M No Transcription factors
Hypothetical protein L798_07165 1 MH1 domain 0 / No Transcription factors
Hypothetical protein L798_07469 1 / 0 M No Transcription factors
Elongation factor Tu 1 Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain 0 / No Translation factors
Elongation factor G2 1 Elongation factor Tu; GTP binding domain 0 M No Translation factors
Cryptochrome 2 1 DNA photolyase; FAD binding domain of DNA photolyase 0 / No DNA repair and recombination protein
Thyroid receptor-interacting protein 11 1 GRIP domain 0 / No DNA repair
Uncharacterized protein LOC103516581 1 / 0 M No DNA binding
Cold shock domain-containing protein E1 1 'Cold-shock' DNA-binding domain 0 / No DNA binding
HMG box-containing protein 1 1 / 0 / No DNA binding
AT-rich interactive domain-containing protein 4B 1 RBB1NT (NUC162) domain; ARID/BRIGHT DNA binding domain 0 / No DNA binding
Nucleoprotein TPR 1 / 0 / No DNA binding
La-related protein 1B 1 / 0 / No mRNA biosynthesis
Mitochondrial fission protein 1 Fis1 C-terminal tetratricopeptide repeat; Fis1 N-terminal tetratricopeptide repeat 1 S No Mitochondrial biogenesis
ESF1 homolog 1 NUC153 domain 0 / No Nucleotide binding
Bromodomain-containing protein 7 1 Bromodomain; Domain of unknown function (DUF3512) 0 / No Protein binding
Bromodomain and WD repeat-containing protein 2 1 / 0 / No Protein binding
Chaoptin 1 / 6 M No Protein binding
Kazrin-A 1 SAM domain (Sterile alpha motif) 0 / No Protein binding
Sorting nexin-17 1 / 0 / No Protein binding
Ring finger protein 160 1 Ring finger domain 0 / No Ring finger protein
Cisplatin resistance-associated overexpressed protein 1 LUC7 N_terminus 0 M No RNA binding
Teneurin-3-like 1 / 0 M No RNA binding
R3H domain-containing protein 1 isoform X1 1 R3H domain; SUZ domain 0 / No RNA binding
Coiled-coil domain-containing protein 12 1 cwf18 pre-mRNA splicing factor 0 / No Spliceosome
Transcription elongation regulator 1 1 WW domain 0 / No Spliceosome
Integrator complex subunit 1 isoform X1 1 / 0 / No Spliceosome
Anaphase-promoting complex subunit 1 / 0 / No Ubiquitin
CD109 antigen-like 1 MG2 domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin family; Alpha-macro-globulin thiol-ester bond-forming region; A-macroglobulin complement component; A-macroglobulin receptor 0 S Yes Antigen
Tubulin-specific chaperone C 1 Tubulin-specific chaperone C N-terminal domain; Tubulin binding cofactor C 0 / No Chaperone protein
Interaptin isoform X2 1 / 1 S Yes Ribosome-binding protein
Notchless protein homolog 1-like 1 NLE (NUC135) domain; WD domain, G-beta repeat 0 / No Ribosome biogenesis
mRNA turnover protein 4 homolog 1 Ribosomal protein L10 0 / No Ribosome biogenesis
Hypothetical protein KGM_12879 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0 / No Ribosome biogenesis
Putative RNA-binding protein 19 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0 / No Ribosome biogenesis
Nucleolar complex protein 3-like protein 1 Nucleolar complex-associated protein; CBF/Mak21 family 0 / No Ribosome biogenesis
30S ribosomal protein S2 1 Ribosomal protein S2 0 / No Ribosomal protein
39S ribosomal protein L38 1 Phosphatidylethanolamine-binding protein 0 / No Ribosomal protein
Uncharacterized protein LOC105558474 1 Ribosomal protein S12/S23 0 / No Ribosomal protein
Heat shock cognate 70 protein 1 Hsp70 protein 0 / No Heat shock protein
DEP domain-containing protein 5 isoform X4 1 / 0 / No Signal transduction protein
Mothers against decapentaplegic homolog 3 1 MH2 domain 0 M No Signal transduction protein
Protein numb 1 Phosphotyrosine interaction domain (PTB/PID) 0 / No Signal transduction protein
Protein numb-like 1 NUMB domain 0 M No Signal transduction protein
Methoprene-tolerant protein 1 PAS domain 0 / No Unknown
Salivap-5 1 / 0 / No Unknown
Cchamide 1 1 / 1 S Yes Unknown
Uncharacterized protein LOC105672384 1 Putative peptidase (DUF1758) 0 / No Unknown
Uncharacterized protein LOC105692561 1 / 3 / No Unknown
Protein Daple 1 / 0 / No Unknown
Rhogtpase 1 BTB/POZ domain 0 / No Unknown
Uncharacterized protein LOC105149357 isoform X1 1 / 0 / No Unknown
Collagen alpha-1(III) chain 1 / 0 / No Unknown
Glutamate receptor ionotropic 1 / 0 / No Unknown
Protein retinal degeneration B isoform X3 1 / 0 / No Unknown
Hypothetical protein L798_11130 1 / 0 M No Unknown
Triple functional domain 1 / 0 / No Unknown
Uncharacterized protein LOC100680511 1 / 0 / No Unknown
Hypothetical protein TcasGA2_TC010304 1 / 0 / No Unknown
Hypothetical protein 1 / 0 S Yes Unknown
Uncharacterized protein LOC103508838 isoform X1 1 / 0 / No Unknown
Uncharacterized protein KIAA1143 homolog 1 Domain of unknown function (DUF4604) 0 M No Unknown
Hypothetical protein L798_03213 1 / 0 / No Unknown
Glucocorticoid-induced transcript 1 protein-like 1 Protein Family FAM117 0 M No Unknown

a The unique matched peptides are shown in S3 Table.

b Protein domains were determined by Pfam version 31.0 (http://pfam.xfam.org/)).

c THMHH Server v. 2.0 (http://www.cbs.dtu.dk/services/TMHMM/) was used to predict transmembrane helices in proteins.

d Subcelluar localization was predicted by TargetP 1.1 Server (http://www.cbs.dtu.dk/services/TargetP/). M stands for mitochondrial targeting peptide. S stands for secretory pathway signal peptide. “/” stands for other.

eSignal peptide was determined by SignalP 4.1 Server (http://www.cbs.dtu.dk/services/SignalP/).