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. 2018 May 4;8:7083. doi: 10.1038/s41598-018-25008-4

Table 1.

Solvent accessibility surface of residues within TDP-43 putative NES.

Amino Acid Residue # Ratio (%) In/Out
ILE 239 16.5 i
ALA 240 0 i
GLN 241 39.1
SER 242 78.5 o
LEU 243 6.3 i
CYS 244 4.1 i
GLY 245 13.5 i
GLU 246 56.4 o
ASP 247 3.6 i
LEU 248 7.8 i
ILE 249 25.5
ILE 250 0.1 i

Using the NMR data from Lukavsky et al.20 and an algorithm developed by Braun et al.44, the solvent accessibility of the putative NES was calculate (hydrophobic residues bolded). The first two columns are the amino acid identity and residue number. The third is the side chain surface area, normalized to a “random coil” of that residue. Resides are classified as solvent exposed if this normalized value exceeds 50% (labelled “o”) and buried if the normalized value is less than 20% (labelled “i”).