Table 2.
GWAS | MOI | Cases | Controls | ʎ | Chr. | Position | Haplotype length | P raw | P genome | SNPs post mperm |
---|---|---|---|---|---|---|---|---|---|---|
Dense *,† | AR | 33 | 81 | 1.06 | C1 | 218,100,114 | NA | 1.30e−20 | 0.00001 | 1 |
- Burmese | AR | 30 | 56 | 1.46 | C1 | 218,200,114 | ~150 Kb | 3.79e−16 | 0.00002 | 15 |
- Birman | AR | 60 | 41 | 1.24 | C1 | 218,100,114 | ~60 Kb | 8.08e−20 | 0.00002 | 13 |
Long hair* | AR | 32 | 22 | 1.17 | B1 | 140,077,554 | ~150 Kb | 8.20e−10 | 0.00010 | 2 |
Color (cs)* | AR | 21 | 28 | 1.41 | D1 | 46,341,460 | ~1 Mb | 2.00e−9 | 0.00040 | 10 |
Orange | X | 24 | 69 | 1.11 | X | 107,777,134 | ~1.5 Mb | 1.20e−20 | 0.00002 | 7 |
*Causative variant is present on the array. †The power to detect Dense was first considered for random bred cats and then for breeds in which the trait is under selection.