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. Author manuscript; available in PMC: 2018 May 7.
Published in final edited form as: Nat Biotechnol. 2018 Apr 5;36(4):316–320. doi: 10.1038/nbt.4101

Table 1.

Metabolomics activity screening examples

Metabolite System Original observation Induced phenotype Reference
Protectin D1 Stem cell differentiation Polyunsaturated fatty acid precursors decrease during differentiation Promotes differentiation into neurons 14
cis-9,10-octadecenoamide (oleamide) Sleep induction Accumulated in cerebrospinal fluid of sleep-deprived felines Induces sleep 41
Trimethylamine N-oxide Cardiovascular disease Augmented in plasma of subjects with cardiovascular risk Increases scavenger receptors expression, foam cell formation and atherosclerotic lesions 27,28
N,N-dimethylsphingosine Chronic pain Increased in a rat model of chronic neuropathic pain Elicits neuropathic pain behavior and cytokine release 21
PI(20:4/20:4) Pathogen killing Upregulated in zymosan-stimulated macrophages Increases superoxide anion production and lysozyme release 16
3-carboxy-4-methyl-5-propyl-2-furanpropanoic acid Gestational and type 2 diabetes Elevated in plasma in human and mice models of gestational diabetes and type 2 diabetes Impairs glucose tolerance and β-cell function 23
9-PAHSA Type 2 diabetes Increased in plasma and adipose tissue of diabetes-protected mice. Decreased in diabetic humans Improves glucose metabolism and insulin sensitivity 22
S-adenosyl methionine Stem cell differentiation Downregulated in naive embryonic stem cells Induces differentiation to primed stem cells 15
cis-7-hexadecenoic acid (16:1n-9) Cardiovascular disease Elevated in atherosclerosis-initiating foamy monocytes and macrophages Decreases inflammatory response to bacterial lipopolysaccharide in monocytes and macrophages 17
Dioxolane A3 Acute inflammation Increased in thrombin-activated platelets Promotes neutrophil recruitment and activation 18
Proline, isoleucine, and phenylalanine Synthetic mutualism Secreted by Zymomonas mobilis Results in rescue and growth of Escherichia coli auxotrophs in co-culture with Z. mobilis 42
l-arginine Adaptive immune response Decreased in activated naive T cells Induces differentiation into memory-like cell, increases survival and anti-tumor activity 19
Taurine Multiple sclerosis Upregulated during oligodendrocyte precursor cell differentiation Enhances oligodendrocyte differentiation and myelination 20