Table 2. Percentage of simulated data sets in which the vector of OPGPs was correctly inferred.
Mean depth | Sequencing error | Software package | ||||
---|---|---|---|---|---|---|
ε | GM | LM2ε | LM2 | OM | JM | |
20 | 0 | 100.0 | 100.0 | 100.0 | 100.0 | 99.9 |
0.002 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | |
0.01 | 100.0 | 100.0 | 100.0 | 100.0 | 98.8 | |
10 | 0 | 100.0 | 100.0 | 100.0 | 100.0 | 99.9 |
0.002 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | |
0.01 | 100.0 | 100.0 | 100.0 | 100.0 | 99.4 | |
2 | 0 | 100.0 | 100.0 | 99.9 | 2.8 | 94.0 |
0.002 | 100.0 | 100.0 | 99.6 | 3.6 | 94.8 | |
0.01 | 100.0 | 100.0 | 99.6 | 4.5 | 93.2 |