Table 2. Sequences of primers used in RT-qPCR for detection of S1 gene of IBV.
Region | Primer | Sequence | Positionb) | Reference |
---|---|---|---|---|
HVRI | C2 | F-TGG TTG GCA TTT ACA CGG GG | 20487–20506 | [33] |
C3a) | R-CAA TGT GTA ACA AAC AC | 20698–20714 | ||
HVRII | HV+ | F-GTT ACA CAT TGT TAT AA | 20704–20720 | [27] |
HV− | R-ACA AGA TCA CCA TTT AA | 20878–20894 |
F=Forward, R=Reverse. a) Modified, b) Annealing site on S1in M41 reference strain of IBV (sequence accession number: AY851295).