Table 2. The homologous comparison of the nucleotide sequence of feline bocavirus HRB2015-LDF and the bocaviruses derived from different hosts available in GenBank.
| Host | Strain or Group | HRB2015-LDF (%) | |||
|---|---|---|---|---|---|
| Genome | VP1 | NP1 | NS1 | ||
| Cat | HK875F | 97.5 | 97.2 | 98.0 | 97.8 |
| HK797F | 97.0 | 96.2 | 98.3 | 97.3 | |
| HK797U | 96.9 | 96.2 | 98.3 | 97.4 | |
| FBD1 | 74.9 | 75.3 | 77.2 | 74.3 | |
| FBD2 | 97.0 | 96.3 | 98.4 | 97.5 | |
| POR1 | 68.7 | 70.7 | 72.4 | 67.2 | |
| MG132 | −a) | − | 98.6 | 98.0 | |
| Rabbit | LBoV 160/01/ITA | 50.9 | 52.7 | 52.6 | 45.0 |
| Gorilla | gorilla/GBoV1/2009 | 49.2 | 55.0 | 53.0 | 45.6 |
| Primate | CPZh2 | 45.4 | 56.5 | 53.0 | 45.4 |
| Bat | BtBoV group | 46.2–59.9 | 51.3–62.9 | 34.6–59.4 | 45.2–49.6 |
| Dog | CMV group | 57.3–60.3 | 60.5–63.3 | 54.2–55.0 | 54.1–54.5 |
| CBoV group | 29.7–58.9 | 60.8–62.1 | 55.6–56.8 | 46.4–47.4 | |
| Sea lion | CslBoV group | 27.6–38.2 | 60.5–62.6 | 53.8–55.9 | 51.9–52.0 |
| Human | HBoV group | 28.9–58.5 | 52.1–53.1 | 54.1–58.7 | 26.9–50.2 |
| Pig | PBoV group | 25.5–52.9 | 30.5–46.9 | 26.4–59.2 | 40.3–43.0 |
CBoV: Canine_bocavirus: CMV: Canine_minute_virus; PBoV: Porcine bocavirus; CslBoV: California sea lion bocavirus; HBoV: Human bocavirus; Bat bocavirus: BtBoV. a) The dash represent that the sequence was not available in GenBank.