Table. Multilocus sequence typing analysis of complete genes from Peru Rickettsia asembonensis molecular isolate VGD7*.
| Changes | Conserved genes (GenBank accession no.) |
Variable genes (GenBank accession no.) |
||||
|---|---|---|---|---|---|---|
| 17-kDa (KY650696) | gltA (KY650697) | ompA (KY650698) | ompB (KY650699) | sca4 (KY650700) | ||
| Genome | ||||||
| Complete ORF, nt | 480 | 1,314 | 5,076 | 4,947 | 3,033 | |
| Identity, % | 100 | 99.8 | 99.9 | 100 | 99.8 | |
| Mutations | None | C 138 T | T 484 G | None | T 383 C | |
| T 537 C | C 828 A | T 807 C | ||||
| A 868 G | A 3838 G | G 1824 T | ||||
| C 4360 G | A 2260 G | |||||
| T 4880 C | T 2492 C | |||||
| Total changes |
0 |
3 |
|
5 |
0 |
5 |
| Protein | ||||||
| Complete protein, aa | 160 | 438 | 1,692 | 1,649 | 1,011 | |
| Identity, % | 100 | 99.8 | 99.8 | 100 | 99.6 | |
| Mutations | None | K 290 E | Y 162 D | None | L 128 P | |
| R 1280 G | Q 608 H | |||||
| L 1454 V | R 754 G | |||||
| V 1627 A | I 831 T | |||||
| Total changes | 0 | 1 | 4 | 0 | 4 | |
*Comparisons were made against reference strain NMRCii from Kenya (GenBank accession no. JWSW01000078.1). Blank cells indicate no additional mutations or changes to report. ORF, open reading frame.