REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
rat anti-BrdU | Abcam | 6326 |
rabbit monoclonal OLFM4 | gift from CST | clone PP7 |
rabbit polyclonal lysozyme | Thermo | RB-372-A1 |
rabbit chromogranin A | Abcam | 15160 |
rabbit cleaved Caspase-3 | CST | 9664 |
rabbit polyclonal Anti-RFP | Rockland | 600-401-379 |
biotin-conjugated secondary donkey anti-rabbit | ImmunoResearch | 711-065-152 |
biotin-conjugated secondary goat anti-rat | ImmunoResearch | 112-065-167 |
anti-Cpt1a | Abcam | 128568 |
anti-HMGCS2 | Sigma | AV41562 |
anti- alpha tubulin | Santa Cruz | 8035 |
anti- total S6 | CST | 2217 |
Chemicals, Peptides, and Recombinant Proteins | ||
Advanced DMEM | Gibco | 12491015 |
DMEM/F12 | Gibco | 11320033 |
SMEM | Life Technologies | 11380-037 |
Murine EGF | PeproTech | 315-09 |
Recombinant Murine Noggin | PeproTech | 250-38 |
R-spondin | Sino Biological | 50316-M08S |
N-acetyl-L-cysteine | Sigma-Aldrich | A9165 |
N2 | Life Technologies | 17502001 |
B27 | Life Technologies | 17504044 |
Chir99021 | LC Laboratories | 04-0004 |
Y-27632 | ApexBio | A3008 |
JAG-1 protein | AnaSpec | AS-61298 |
Palmitic acid | Cayman Chemical Company | 10006627 |
Etomoxir | Sigma | E1905 |
GW501516 | LC Laboratories | G-4789 |
KD3010 | Dr. Albert R. La Spada | |
Tamoxifen | Sigma-Aldrich | T5648-1G |
4-Hydroxytamoxifen | Calbiochem | 579002 |
13C-Palmitate | Sigma | 605573 |
13C-Glucose | Sigma | 389374 |
Sunflower Seed Oil | Spectrum | S1929 |
Deposited Data | ||
RNA sequencing data | GEO repository | GEO: GSE89568 |
Experimental Models: Organisms/Strains | ||
Cpt1aloxP/loxP | Dr. Peter Carmeliet | |
Villin-CreERT2 | Dr. Sylvie Robine | |
Lgr5-EGFP-IRES-CreERT2;Rosa26-lacZ | The Jackson Laboratory | 008875 |
Lgr5 -IRES-CreERT2 | Dr. Hans Clevers | |
tdTomatoLSL | The Jackson Laboratory | 007909 |
Oligonucleotides | ||
See Table S1 for Primers for Real-time PCR | Integrated DNA Technologies (IDT) | N/A |
Software and Algorithms | ||
FlowJo v10 | FlowJo LLC. | https://www.flowjo.com/ |
GraphPad Prism 7 | GraphPad Software | https://www.graphpad.com/scientific-software/prism/ |
Qlucore Omics Explorer 3.2 | Qlucore | https://www.qlucore.com/ |
Other | ||
In situ hybridization probe for mouse Cpt1a Mm-Cpt1a |
Advanced Cell Diagnostics, Inc. | 443071 |
In situ hybridization probe for mouse Hmgcs2 Mm-Hmgcs2 |
Advanced Cell Diagnostics, Inc. | 437141 |
In situ hybridization probe for mouse Lgr5 Mm-Lgr5 |
Advanced Cell Diagnostics, Inc. | 312171 |