Figure 2.

Collinearity analysis of the complete genome between M. bovirhinis strain GS01 and HAZ141_2. (a): Two genomes on parallel collinearity. The upper and lower shafts represent the sequenced and reference genomes, respectively. The orange box in the axes indicates the genomic forward strand, and the blue one corresponds to the reverse chain. The filled color in the box denotes alignment similarity, and the complete filling suggests 100% similarity. The color of the link graph between the upper and lower axes represents alignment type: pink, purple, yellow, and green denote collinear, translocation, inversion, and translocation+inversion, respectively. (b): Two-dimensional comparison between two genomes. The vertical and horizontal axes represent GS01 genome and reference HAZ141_2 genome, respectively. The blue line shows the reverse chain, and the red line corresponds to forward alignment. The pink and green modules indicate collinear and translocation+inversion between them, respectively.