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. 2018 May 8;13(5):e0196966. doi: 10.1371/journal.pone.0196966

Table 1. Barley candidate reference genes and primer sequences.

Gene (Abbreviation) GenBank Accession Number Forward Primer Reverse Primer Amplicon Size (bp)a PCR Efficiency (%) R2
Actin (ACT)[14] AY14545.1 GGCATGGAGTCTTCTGGAATCC CCACCACTGAGCACTATGTTTC 115 102.63 1.00
ADP-ribosylation factor 1-like protein (ADP)[15] AK365041.1 GCTCTCCAACAACATTGCCAAC GAGACATCCAGCATCATTCATTCC 77 105.97 0.99
ATP Binding Protein (ABC)[16] AK365041.1 ATCTGAGGTCTCGGTTCGGA TCCTTCAGCTGACAACGGTC 116 99.28 1.00
Cyclophilin (CYP)[14] AK248688.1 CCTGTCGTGTCGTCGGTCTAAA ACGCAGATCCAGGAGCCTAAAG 122 98.44 1.00
Glyceraldehyde 3-Phosphate Dehydrogenase (GAPDH)[17] X60343.1 GCCAGTTACTGTCTTTGGCGTC GGCCTTGTCCTGTCAGTGAAG 108 93.40 1.00
Glycine Rich RNA Binding Protein (GRBP)[17] Z48624.1 CGCCCAGTTATCCATCCATCTA AAAAACACCACAGGACCGGAC 112 99.47 1.00
Heat Shock Protein 70 (HSP70)[17] AK354795.1 GCTCAACATGGACCTCTTCAGG CCGACAAGGACAACATCATGG 101 96.2 1.00
Heat Shock Protein 90 (HSP90)[17] AY325266.1 CAAGAAGCTTGTCTCTGCCACC ACAGCCCCTCGAACTTCTCCTT 100 94.50 1.00
Small Nucleolar RNA 14 (SnoR14)[15] AK373867.1 GATGTTTATGTATGATAGTCTGTC GTCGGGATGTATGCGTGTC 67 98.73 1.00
Small Nucleolar RNA 23 (SnoR23)[15] AK373724.1 TCGGCAGTGGTGTCATC CTCAGTGGAAAGAGAAGTCG 64 104.63 1.00
Translationally Controlled Tumor Protein (TCTP)[16] AF230786.1 TTCCGTCTTCAGGAGCAACC ATGCTCTCGCCCACAAAGAA 177 100.46 1.00
Tubulin Alpha-2 Chain (α-TUB)[15] U40042.1 GTCCACCCACTCCCTCCTTG CGGCGGCAGATGTCATAGATG 78 100.77 1.00
Ubiquitin (UBQ)[18] AK249354.1 TCAAGGTGAAGACACTTACTGG CATAGATGAGCCTCTGTTGAAC 128 96.71 1.00

aAmplicons located in the coding region.