Table 3.
Gene | Chr. | Location on chromosome(1) | P-value by exact test | Odds ratio | P-value | 95% Cl |
---|---|---|---|---|---|---|
LOC102130113(2) protein theta pseudogene | 5 | 163,236,012 | 2.0 × 10−4 | 16.1 | 3.1 × 10−3 | 1.832–784.237 |
5 | 163,262,889 | 2.0 × 10−4 | 16.1 | 3.1 × 10−3 | 1.832–784.237 | |
5 | 163,263,047 | 2.0 × 10−4 | 16.1 | 3.1 × 10−3 | 1.832–784.237 | |
5 | 163,263,341 | 2.0 × 10−4 | 16.1 | 3.1 × 10−3 | 1.832–784.237 | |
LOC102128847 beta-citrylglutamate synthase B pseudogene | 14 | 77,876,668 | 2.4 × 10−3 | 9.9 | 8.4 × 10−4 | 2.116–59.352 |
IL36G 3′UTR | 13 | 17,133,365 | 4.4 × 10−3 | 8.9 | 3.2 × 10−3 | 1.773–63.019 |
13 | 17,133,758 | 3.2 × 10−3 | 11.4 | 2.0 × 10−3 | 1.928–127.17 |
(1)The positions are based on the assembly of the Macaca fascicularis genome MacFas5.0 (GCA 000364345.1).
(2)The genotypes of the 42 animals were strictly homologous (base of reference/variant) for the four candidate SNPs inside LOC102130113. Therefore, the p values and odds ratio are identical.