Extracted fragment ATDs of Hex5 and Hex6-containing ions. (a) Ions of composition Hex5-O-CH=CH-O- (m/z 869). Red trace, ion ak from Man5GlcNAc2 (2). Blue and green traces, ions ag and ah from Man6GlcNAc2 (3) and Man7GlcNAc2 (4). Light blue trace, ion af from Man9GlcNAc2 (9). Purple trace from the d1d1d2 isomer of Man8GlcNAc2 (7), major peak, ion ai. Black trace, ion aj from glycans containing mannose 8 in the 6-antenna. Orange trace, ion al from glycans 13, 14, and 15, containing three glucose residues in the 3-antenna. (b) Fragments of composition Hex6GlcNAc1-O-CH=CH-O- (m/z 1234). Red trace: ion am from Man6GlcNAc2. Blue trace, second peak, ion ao from the d1d1d3 isomer of Man8GlcNAc2 (6). Pink trace, ATD from Glc3Man8GlcNAc2 (14) containing ions am and ao. Green trace, ion an from Man9GlcNAc2 (9) and its glucosylated analogues (12 and 15). (c) Fragments of composition Hex6-O-CH=CH-O- (m/z 1031) with structures similar to those in Panel a. Orange trace, ion aq from S. cerevisiae